RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAR2Q96K12 515 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ALG9Q9H6U8 611 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ATP13A3Q9H7F0 1226 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 UTS2RQ9UKP6 389 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 COL4A5P29400 1685 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 UBFD1O14562 309 aaKnown RBP13.77□□□□□ -0.2
SCARB2-227ENST00000640957 ANGPT2O15123 496 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 KRT75O95678 551 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 CHEK2O96017 543 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 BMP2P12643 396 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 CHRNA4P43681 627 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 DIO3P55073 304 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 OXA1LQ15070 435 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 AAK1Q2M2I8 961 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 DEFB106AQ8N104 65 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 DNERQ8NFT8 737 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 OR52K2Q8NGK3 314 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 DMRTB1Q96MA1 342 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 C1QTNF1Q9BXJ1 281 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 CDT1Q9H211 546 aa13.77□□□□□ -0.2
SCARB2-227ENST00000640957 MAP3K20Q9NYL2 800 aaKnown RBP13.77□□□□□ -0.2
SCARB2-227ENST00000640957 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.2
SCARB2-227ENST00000640957 PMPCBO75439 489 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 MFN2O95140 757 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 MPOP05164 745 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 VDRP11473 427 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 CYP4B1P13584 511 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 KCNC1P48547 511 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 EFNA5P52803 228 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 ARPP19P56211 112 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 STX1BP61266 288 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 NCS1P62166 190 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 RACK1P63244 317 aaKnown RBP13.77□□□□□ -0.21
SCARB2-227ENST00000640957 ZBTB17Q13105 803 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 PAGE2Q7Z2X7 111 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 OR13F1Q8NGS4 319 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 PCYT2Q99447 389 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 CENPOQ9BU64 300 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 BBS2Q9BXC9 721 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 CCM2LQ9NUG4 571 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-227ENST00000640957 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 M0R3G1 203 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 TBX1O43435 398 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 STMN1P16949 149 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 GTF2E2P29084 291 aaKnown RBP13.77□□□□□ -0.21
SCARB2-227ENST00000640957 AXLP30530 894 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 INPP5AQ14642 412 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 SPANXN3Q5MJ09 141 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 USP34Q70CQ2 3546 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 SLC22A15Q8IZD6 547 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 KLRG1Q96E93 195 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 NSUN5Q96P11 429 aaKnown RBP13.77□□□□□ -0.21
SCARB2-227ENST00000640957 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 TMEM181Q9P2C4 612 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 SIPA1L1O43166 1804 aa13.77□□□□□ -0.21
SCARB2-227ENST00000640957 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-227ENST00000640957 C19orf81C9J6K1 198 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 CLDN5O00501 218 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 GGT5P36269 586 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 XAF1Q6GPH4 301 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 PIM3Q86V86 326 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 ADGRG5Q8IZF4 528 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 TUBGCP3Q96CW5 907 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 CENPNQ96H22 339 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-227ENST00000640957 TEX37Q96LM6 180 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 MLPHQ9BV36 600 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-227ENST00000640957 SPATC1LQ9H0A9 340 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 AKTIPQ9H8T0 292 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 SPC25Q9HBM1 224 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 SPO11Q9Y5K1 396 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 MAFBQ9Y5Q3 323 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-227ENST00000640957 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 CAPNS1P04632 268 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 BMP4P12644 408 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 LMO2P25791 158 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 CCT8P50990 548 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 SYPL2Q5VXT5 272 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 IER5Q5VY09 327 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 USP43Q70EL4 1123 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 CHID1Q9BWS9 393 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 PCDHB3Q9Y5E6 796 aa13.76□□□□□ -0.21
SCARB2-227ENST00000640957 LY75O60449 1722 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms