RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 VIPR1P32241 457 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 ZBED6P86452 979 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 FANCCQ00597 558 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 HLTFQ14527 1009 aaKnown RBP eCLIP17.58■□□□□ 0.4
VPS51-217ENST00000639871 ACOX1Q15067 660 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 TCEA2Q15560 299 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 TDRD12Q587J7 1177 aaKnown RBP17.58■□□□□ 0.4
VPS51-217ENST00000639871 LUZP1Q86V48 1076 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 SFTPA2Q8IWL1 248 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 ARL14Q8N4G2 192 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 GPBAR1Q8TDU6 330 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 IQCDQ96DY2 449 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 NUS1Q96E22 293 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 CCDC97Q96F63 343 aaPredicted RBP17.58■□□□□ 0.4
VPS51-217ENST00000639871 DTD2Q96FN9 168 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 WBP1Q96G27 269 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 BTBD6Q96KE9 485 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 ACSL6Q9UKU0 697 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 PCDHGA7Q9Y5G6 932 aa17.58■□□□□ 0.4
VPS51-217ENST00000639871 PRSS38A1L453 326 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 NPIPB15A6NHN6 443 aaPredicted RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 EIF4E1BA6NMX2 242 aaKnown RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 TMX2-CTNND1H3BSU7 103 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 ERVH48-1M5A8F1 160 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 PLD2O14939 933 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 TNFSF15O95150 251 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 PGLSO95336 258 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 CPP00450 1065 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 PRB1P04280 392 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 RPLP0P05388 317 aaKnown RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 CEACAM5P06731 702 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 SERPINB6P35237 376 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 MMP13P45452 471 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 MAXP61244 160 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 ZFP36L1Q07352 338 aaKnown RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 C14orf28Q4W4Y0 310 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 MARC1Q5VT66 337 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 BROXQ5VW32 411 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 ALG1LQ6GMV1 187 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 HSD11B1LQ7Z5J1 315 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 TAF8Q7Z7C8 310 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 NRROSQ86YC3 692 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 BBS5Q8N3I7 341 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 ATPAF2Q8N5M1 289 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 FAM46DQ8NEK8 389 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 CCL4L1Q8NHW4 92 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 PIH1D2Q8WWB5 315 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 FATE1Q969F0 183 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 GFM1Q96RP9 751 aaKnown RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 NUP85Q9BW27 656 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 FRMD8Q9BZ67 464 aaPredicted RBP17.57■□□□□ 0.4
VPS51-217ENST00000639871 CPNE5Q9HCH3 593 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 ANAPC7Q9UJX3 599 aa17.57■□□□□ 0.4
VPS51-217ENST00000639871 NUDT21O43809 227 aaKnown RBP17.56■□□□□ 0.4
VPS51-217ENST00000639871 CD48P09326 243 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 ETV3P41162 512 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 RHDQ02161 417 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 DPTQ07507 201 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 IHHQ14623 411 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 TSR1Q2NL82 804 aaKnown RBP17.56■□□□□ 0.4
VPS51-217ENST00000639871 ALKBH5Q6P6C2 394 aaKnown RBP17.56■□□□□ 0.4
VPS51-217ENST00000639871 SPRED1Q7Z699 444 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 HEATR4Q86WZ0 1026 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 CCNJLQ8IV13 435 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 MAML1Q92585 1016 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 SCARF2Q96GP6 870 aaPredicted RBP17.56■□□□□ 0.4
VPS51-217ENST00000639871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
VPS51-217ENST00000639871 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 TRNAU1APQ9NX07 287 aaKnown RBP17.56■□□□□ 0.4
VPS51-217ENST00000639871 SLC17A4Q9Y2C5 497 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 RNF215Q9Y6U7 377 aa17.56■□□□□ 0.4
VPS51-217ENST00000639871 MYO1FO00160 1098 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 SOD1P00441 154 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 GYPCP04921 128 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 CYP2A6P11509 494 aaPredicted RBP17.55■□□□□ 0.4
VPS51-217ENST00000639871 CCNB1P14635 433 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 NFKBIAP25963 317 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 HNRNPH3P31942 346 aaKnown RBP17.55■□□□□ 0.4
VPS51-217ENST00000639871 INHBCP55103 352 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 UBASH3AP57075 661 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 CDK3Q00526 305 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 B4GALNT1Q00973 533 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 VAC14Q08AM6 782 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 C19orf57Q0VDD7 668 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 GALNT2Q10471 571 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 MMRN1Q13201 1228 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 CLN3Q13286 438 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 NR1D2Q14995 579 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 PAFAH1B3Q15102 231 aaKnown RBP17.55■□□□□ 0.4
VPS51-217ENST00000639871 PTPRRQ15256 657 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 SPECC1LQ69YQ0 1117 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 Q6ZVL8 140 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 RAB11FIP2Q7L804 512 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 ZNF438Q7Z4V0 828 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 TSPAN33Q86UF1 283 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 NLRP8Q86W28 1048 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 PAF1Q8N7H5 531 aa17.55■□□□□ 0.4
VPS51-217ENST00000639871 PDCD6IPQ8WUM4 868 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms