RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 IGSF5Q9NSI5 407 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 TBC1D30Q9Y2I9 924 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 ILVBLA1L0T0 632 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 GRXCR1A8MXD5 290 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 NPHS1O60500 1241 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 EPOP01588 193 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 HLA-DPA1P20036 260 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 ATP5F1P24539 256 aaPredicted RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 RGRP47804 291 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 ARSDP51689 593 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 SESN3P58005 492 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 DNAJB13P59910 316 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 CAMK1Q14012 370 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 CSHL1Q14406 222 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 SLC14A2Q15849 920 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 TECRLQ5HYJ1 363 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 AGAP9Q5VTM2 703 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 PIWIL4Q7Z3Z4 852 aaKnown RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 SETD3Q86TU7 594 aaPredicted RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 TXNDC5Q8NBS9 432 aaKnown RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 OR6P1Q8NGX9 317 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 WFDC5Q8TCV5 224 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 MICAL1Q8TDZ2 1067 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 IFT43Q96FT9 208 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 FEM1CQ96JP0 617 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 EXOC2Q96KP1 924 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 NSMCE3Q96MG7 304 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 ZNF599Q96NL3 588 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 SHCBP1LQ9BZQ2 653 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 MUC3BQ9H195 1237 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 WDR55Q9H6Y2 383 aaPredicted RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 NCKIPSDQ9NZQ3 722 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 CFAP97Q9P2B7 532 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 LZTS1Q9Y250 596 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 GOLGA8QA0A0J9YX86 632 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 LOC100653049A0A140TA62 436 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 GOLGA8OA6NCC3 632 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 GOLGA8NF8WBI6 632 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 KDELR3O43731 214 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 SNAP91O60641 907 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 KRT34O76011 436 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 SNUPNO95149 360 aaKnown RBP15.12■□□□□ 0.01
TRIM3-215ENST00000639856 COX4I1P13073 169 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 MZF1P28698 734 aaPredicted RBP15.12■□□□□ 0.01
TRIM3-215ENST00000639856 VHLP40337 213 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 ACVR1Q04771 509 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 HECTD2Q5U5R9 776 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 C1orf146Q5VVC0 180 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
TRIM3-215ENST00000639856 FRMD7Q6ZUT3 714 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 CCNYL1Q8N7R7 359 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 PHOSPHO2Q8TCD6 241 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 DTX3LQ8TDB6 740 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 PEX13Q92968 403 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 DDX50Q9BQ39 737 aaKnown RBP15.12■□□□□ 0.01
TRIM3-215ENST00000639856 RETREG1Q9H6L5 497 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 GPAMQ9HCL2 828 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 ASAH2Q9NR71 780 aa15.12■□□□□ 0.01
TRIM3-215ENST00000639856 UBA2Q9UBT2 640 aaPredicted RBP15.12■□□□□ 0.01
TRIM3-215ENST00000639856 GFRA2O00451 464 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CCL22O00626 93 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 GRM6O15303 877 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 FGF1P05230 155 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 EPHA3P29320 983 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 SERPINB5P36952 375 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LAMB3Q13751 1172 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LSM12Q3MHD2 195 aaKnown RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 RALGPS1Q5JS13 557 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 PPM1LQ5SGD2 360 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ALG1LQ6GMV1 187 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 KLC3Q6P597 504 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LINGO4Q6UY18 593 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ACAD11Q709F0 780 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 BBS7Q8IWZ6 715 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ELMOD1Q8N336 334 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ACTRT2Q8TDY3 377 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 SCG3Q8WXD2 468 aaKnown RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CCDC126Q96EE4 140 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 TCEAL4Q96EI5 215 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 SGF29Q96ES7 293 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CNDP1Q96KN2 507 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 UBXN10Q96LJ8 280 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 SLC46A2Q9BY10 475 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 NUF2Q9BZD4 464 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 POMKQ9H5K3 350 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 VWA7Q9Y334 891 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 GBF1Q92538 1859 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 H0Y626 953 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 NEMP1O14524 444 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LATS1O95835 1130 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 S1PR4O95977 384 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CCDC166P0CW27 439 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 SLC7A9P82251 487 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ARF5P84085 180 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 PFKPQ01813 784 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CMPK2Q5EBM0 449 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms