RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 NCSTNQ92542 709 aa14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 MAELQ96JY0 434 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 TMEM74Q96NL1 305 aa14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 ADAM2Q99965 735 aa14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 RAD54BQ9Y620 910 aa14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 MYLKQ15746 1914 aa14.05□□□□□ -0.16
CACNA1A-228ENST00000636610 HGFP14210 728 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CAPN3P20807 821 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 FMO4P31512 558 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 AGTR2P50052 363 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CPT1AP50416 773 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 PURAQ00577 322 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 PFKPQ01813 784 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 SQLEQ14534 574 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 UNC50Q53HI1 259 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 KIAA0930Q6ICG6 404 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CNTN4Q8IWV2 1026 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 KLHDC9Q8NEP7 349 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 IGSF8Q969P0 613 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 SUPT3HB4E1H0 165 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 NME4O00746 187 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 INPP4BO15327 924 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 SUPT3HO75486 399 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 S1PR4O95977 384 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 GOT2P00505 430 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ZNF467Q7Z7K2 595 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 PGBD5Q8N414 524 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 RTL3Q8N8U3 475 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 RPRD1AQ96P16 312 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 MRPS26Q9BYN8 205 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ABCC13Q9NSE7 274 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 MUSKO15146 869 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CDK14O94921 469 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 TSPY1Q01534 308 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 PRKCQQ04759 706 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 PLCL1Q15111 1095 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ZNF678Q5SXM1 525 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 KDELC1Q6UW63 502 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ZNF280BQ86YH2 543 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 AFAP1L2Q8N4X5 818 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 FBXL20Q96IG2 436 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 TEX37Q96LM6 180 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 TSGA13Q96PP4 275 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 CDK15Q96Q40 435 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 SPON2Q9BUD6 331 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 GMIPQ9P107 970 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 HSFX1Q9UBD0 423 aa14.04□□□□□ -0.16
CACNA1A-228ENST00000636610 ANGPT2O15123 496 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 KPNA6O60684 536 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 STAMBPO95630 424 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 STT3AP46977 705 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 AAK1Q2M2I8 961 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 AHI1Q8N157 1196 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 CATSPER1Q8NEC5 780 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 DLG3Q92796 817 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 SLC25A23Q9BV35 468 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 CSNK1G1Q9HCP0 422 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 BPIFA1Q9NP55 256 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 MAP10Q9P2G4 905 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 GALPQ9UBC7 116 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 PLXNB2O15031 1838 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 PDCD11Q14690 1871 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 CCDC162PA2VCL2 907 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 PSMD3O43242 534 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 HTRA2O43464 458 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 RBP1P09455 135 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 MAP2K5Q13163 448 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 HERC3Q15034 1050 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 ACBD6Q9BR61 282 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 IKZF3Q9UKT9 509 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 ZSWIM8A7E2V4 1837 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 TSC2P49815 1807 aa14.03□□□□□ -0.16
CACNA1A-228ENST00000636610 TRIM24O15164 1050 aa14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 KPNA2P52292 529 aaKnown RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 MLLT6P55198 1093 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 YWHAHQ04917 246 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 FAM110CQ1W6H9 321 aa14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 OTUD3Q5T2D3 398 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 LARP4Q71RC2 724 aaKnown RBP eCLIP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 CHERPQ8IWX8 916 aaKnown RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 RSPH1Q8WYR4 309 aa14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 RMND5BQ96G75 393 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 RRN3Q9NYV6 651 aa14.02□□□□□ -0.16
CACNA1A-228ENST00000636610 A0A0D9SEW6 157 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 HAS3O00219 553 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 PFDN1O60925 122 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC2A3P11169 496 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 PCNAP12004 261 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms