RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 RAMP2O60895 175 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 DNAJB5O75953 348 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 CEACAM5P06731 702 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 RHOQP17081 205 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 NOP2P46087 812 aaKnown RBP18.15■□□□□ 0.5
CLN6-212ENST00000636020 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 PNCKQ6P2M8 343 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 FAM131BQ86XD5 332 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 ZSWIM9Q86XI8 627 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 SLC34A3Q8N130 599 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 TRIM55Q9BYV6 548 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 SYNCQ9H7C4 482 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 PDZD2O15018 2839 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 CSMD2Q7Z408 3487 aa18.15■□□□□ 0.5
CLN6-212ENST00000636020 CDC14CA4D256 554 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 POLR1CO15160 346 aaPredicted RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 INPP4BO15327 924 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 TEX33O43247 280 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 GM2AP17900 193 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 CTBSQ01459 385 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 NRG1Q02297 640 aaPredicted RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 RALGDSQ12967 914 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 PRR30Q53SZ7 412 aaPredicted RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 ZNF658Q5TYW1 1059 aaPredicted RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 BRAT1Q6PJG6 821 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 LIPIQ6XZB0 460 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 ENOSF1Q7L5Y1 443 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 PDCD6IPQ8WUM4 868 aaKnown RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 AHCYL2Q96HN2 611 aaKnown RBP18.14■□□□□ 0.49
CLN6-212ENST00000636020 CEP63Q96MT8 703 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 NCAPGQ9BPX3 1015 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 SLC29A3Q9BZD2 475 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 ZMYND15Q9H091 742 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 LHX3Q9UBR4 397 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 OR12D3Q9UGF7 316 aa18.14■□□□□ 0.49
CLN6-212ENST00000636020 BUB1BO60566 1050 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 RECKO95980 971 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 MYCLP1P12525 358 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 PRF1P14222 555 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 GNPDA1P46926 289 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 PGDP52209 483 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 SEMA5AQ13591 1074 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 TRNP1Q6NT89 227 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 WDR74Q6RFH5 385 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 ZNF761Q86XN6 746 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 OR10G6Q8NH81 332 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 PTCD2Q8WV60 388 aaKnown RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 EXOC2Q96KP1 924 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 ZNF641Q96N77 438 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 FRMD8Q9BZ67 464 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 KLC2Q9H0B6 622 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 MLXIPLQ9NP71 852 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 RCOR3Q9P2K3 495 aaPredicted RBP18.13■□□□□ 0.49
CLN6-212ENST00000636020 SUFUQ9UMX1 484 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 NEU3Q9UQ49 428 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 NF1P21359 2839 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 HIVEP1P15822 2718 aa18.13■□□□□ 0.49
CLN6-212ENST00000636020 KATNA1O75449 491 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 CREG1O75629 220 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 ZNF28P17035 718 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 FLT3P36888 993 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 SCNN1AP37088 669 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 USP8P40818 1118 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 PEX6Q13608 980 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 GRM3Q14832 879 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 CYTH1Q15438 398 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 KRTAP21-3Q3LHN1 58 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 GJB7Q6PEY0 223 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 C6orf15Q6UXA7 325 aaPredicted RBP18.12■□□□□ 0.49
CLN6-212ENST00000636020 ULBP3Q9BZM4 244 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 TWSG1Q9GZX9 223 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 NOL6Q9H6R4 1146 aaKnown RBP18.12■□□□□ 0.49
CLN6-212ENST00000636020 RMND1Q9NWS8 449 aa18.12■□□□□ 0.49
CLN6-212ENST00000636020 PIPSLA2A3N6 862 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 FAM72CH0Y354 149 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 ZNF202O95125 648 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 ELFN1P0C7U0 828 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 ADCY8P40145 1251 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 FASLGP48023 281 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 PPM1FP49593 454 aaPredicted RBP18.11■□□□□ 0.49
CLN6-212ENST00000636020 CFAP58Q5T655 872 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 FAM72AQ5TYM5 149 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 AFMIDQ63HM1 303 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 FAM72DQ6L9T8 149 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 LYSMD3Q7Z3D4 306 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 FAM72BQ86X60 149 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 DNAAF5Q86Y56 855 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 CAMK1DQ8IU85 385 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 CFAP57Q96MR6 1250 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 SLC38A3Q99624 504 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 SLC25A23Q9BV35 468 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 TEX101Q9BY14 249 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 SIDT1Q9NXL6 827 aaKnown RBP18.11■□□□□ 0.49
CLN6-212ENST00000636020 KCND3Q9UK17 655 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 SLC5A6Q9Y289 635 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 PCDHGA9Q9Y5G4 932 aaKnown RBP18.11■□□□□ 0.49
CLN6-212ENST00000636020 PCDHGA6Q9Y5G7 932 aa18.11■□□□□ 0.49
CLN6-212ENST00000636020 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
CLN6-212ENST00000636020 ADRA1BP35368 520 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms