RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MBL2P11226 248 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 RAG1P15918 1043 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PTPN4P29074 926 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SLC6A4P31645 630 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 DGKGP49619 791 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 HK2P52789 917 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PRAMEP78395 509 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 ELF3P78545 371 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SMAD1Q15797 465 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SIRPB2Q5JXA9 342 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CYB5D1Q6P9G0 228 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 BNC2Q6ZN30 1099 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SLC41A1Q8IVJ1 513 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CFAP52Q8N1V2 620 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 LSMEM1Q8N8F7 131 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PIWIL2Q8TC59 973 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 BRSK1Q8TDC3 778 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SCG3Q8WXD2 468 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 NSL1Q96IY1 281 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 ELMO2Q96JJ3 720 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PSKH2Q96QS6 385 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 KCNK17Q96T54 332 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 YME1L1Q96TA2 773 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 MGME1Q9BQP7 344 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 LRMDAQ9H2I8 198 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 TNKS2Q9H2K2 1166 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SMOC1Q9H4F8 434 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 TASP1Q9H6P5 420 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 RC3H2Q9HBD1 1191 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PDFQ9HBH1 243 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 LNPEPQ9UIQ6 1025 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 AGO1Q9UL18 857 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CORO1CQ9ULV4 474 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 RUVBL2Q9Y230 463 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 APOBEC2Q9Y235 224 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 TBC1D30Q9Y2I9 924 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 NYNRINQ9P2P1 1898 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CCDC78A2IDD5 438 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 H3BNC9 293 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 M0R3H8 397 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 TRAFD1O14545 582 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 MGRN1O60291 552 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CRTAMO95727 393 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 MYL4P12829 197 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 HNRNPH1P31943 449 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SLC1A2P43004 574 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CHRNA4P43681 627 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 LEPRP48357 1165 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CSRP3P50461 194 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 AQP5P55064 265 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CTBP1Q13363 440 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 RIPK1Q13546 671 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 TCEA2Q15560 299 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF470Q6ECI4 717 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CCDC149Q6ZUS6 474 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SDCCAG8Q86SQ7 713 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 ZBTB46Q86UZ6 589 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PACS2Q86VP3 889 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 PGBD5Q8N414 524 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 STYXQ8WUJ0 223 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 EAF1Q96JC9 268 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 ACE2Q9BYF1 805 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CAB39LQ9H9S4 337 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 GKN1Q9NS71 199 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 SLC2A6Q9UGQ3 507 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 LSM7Q9UK45 103 aaKnown RBP7.18□□□□□ -1.26
BRCA1-230ENST00000634433 DNAJC16Q9Y2G8 782 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 INSL5Q9Y5Q6 135 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 AK5Q9Y6K8 562 aa7.18□□□□□ -1.26
BRCA1-230ENST00000634433 INSIG1O15503 277 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 KLHL2O95198 593 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 F11P03951 625 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 ATXN1LP0C7T5 689 aaKnown RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 IRF1P10914 325 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 TYRP1P17643 537 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 PFKLP17858 780 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 SAT1P21673 171 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 CALB2P22676 271 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 ARNTP27540 789 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 HOXD9P28356 352 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 HOXD12P35452 270 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 RPS24P62847 133 aaKnown RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 DEFB103AP81534 67 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 SMAD3P84022 425 aaKnown RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 NSUN2Q08J23 767 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 MSLNQ13421 630 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 ITGA9Q13797 1035 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 SNCBQ16143 134 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 FAM83EQ2M2I3 478 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 MRNIPQ6NTE8 343 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 KLC3Q6P597 504 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 ZYG11AQ6WRX3 759 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 DENND6AQ8IWF6 608 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
BRCA1-230ENST00000634433 ELMOD1Q8N336 334 aa7.17□□□□□ -1.26
BRCA1-230ENST00000634433 HJURPQ8NCD3 748 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms