RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 KCNT1Q5JUK3 1230 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 C6orf141Q5SZD1 244 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 B3GNT6Q6ZMB0 384 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 CACNA2D4Q7Z3S7 1137 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 WDR63Q8IWG1 891 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 RNF113BQ8IZP6 322 aaKnown RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 PLD5Q8N7P1 536 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NFKBIDQ8NI38 313 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NEK9Q8TD19 979 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 DNAAF4Q8WXU2 420 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 KLHL29Q96CT2 875 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 HVCN1Q96D96 273 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 KIF1BPQ96EK5 621 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 SLC41A2Q96JW4 573 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 DOCK7Q96N67 2140 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NUF2Q9BZD4 464 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NDST4Q9H3R1 872 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 PLEKHA4Q9H4M7 779 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 BRF2Q9HAW0 419 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 AAR2Q9Y312 384 aaKnown RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 SCINQ9Y6U3 715 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 MID1O15344 667 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 SP1P08047 785 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 CDAP32320 146 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 GNL1P36915 607 aaPredicted RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 TMPOP42166 694 aaKnown RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 MAPK9P45984 424 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 GNAQP50148 359 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPH2P55795 449 aaKnown RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 GAGE5Q13069 117 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 GAGE6Q13070 117 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 ZBTB17Q13105 803 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 MMEL1Q495T6 779 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 SETMARQ53H47 684 aaPredicted RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 SGO1Q5FBB7 561 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 CCNYL2Q5T2Q4 361 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 WDR73Q6P4I2 378 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 INO80CQ6PI98 192 aaPredicted RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 SLC46A3Q7Z3Q1 461 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 KMT5CQ86Y97 462 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 ARMC8Q8IUR7 673 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 ZBTB2Q8N680 514 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 TSPYL6Q8N831 410 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 MYRIPQ8NFW9 859 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 HUS1BQ8NHY5 278 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 HTRA1Q92743 480 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 LRRC1Q9BTT6 524 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 MMP28Q9H239 520 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 PLEKHA5Q9HAU0 1116 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 GPR108Q9NPR9 543 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 HINT3Q9NQE9 182 aaKnown RBP3.29□□□□□ -1.88
SRP54-214ENST00000630962 ASAH2Q9NR71 780 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 ABCF3Q9NUQ8 709 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 LUZP4Q9P127 313 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 HSPB7Q9UBY9 170 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 TCF19Q9Y242 345 aa3.29□□□□□ -1.88
SRP54-214ENST00000630962 ASPDHA6ND91 283 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 LILRA5A6NI73 299 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 C16orf97H3BN30 126 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 NCAM2O15394 837 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 CRYAAP02489 173 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 UMODP07911 640 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPA1P09651 372 aaKnown RBP eCLIP3.28□□□□□ -1.88
SRP54-214ENST00000630962 RNF224P0DH78 156 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 SHMT1P34896 483 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 HOXA1P49639 335 aaPredicted RBP3.28□□□□□ -1.88
SRP54-214ENST00000630962 ZNF132P52740 706 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 PDE1BQ01064 536 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 FOXM1Q08050 763 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 NEXNQ0ZGT2 675 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 PTP4A2Q12974 167 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 GRIK3Q13003 919 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 PRICKLE4Q2TBC4 344 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 FRG2Q64ET8 278 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 LRRC8EQ6NSJ5 796 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 RGMBQ6NW40 437 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 SLC36A4Q6YBV0 504 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 ZNF329Q86UD4 541 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 CHERPQ8IWX8 916 aaKnown RBP3.28□□□□□ -1.88
SRP54-214ENST00000630962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.28□□□□□ -1.88
SRP54-214ENST00000630962 SPATA6LQ8N4H0 392 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 TBATAQ96M53 351 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 KLHL15Q96M94 604 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 TTC14Q96N46 770 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 NODALQ96S42 347 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 HAUS8Q9BT25 410 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 PDCL3Q9H2J4 239 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 ESRP2Q9H6T0 727 aaKnown RBP3.28□□□□□ -1.88
SRP54-214ENST00000630962 NOX4Q9NPH5 578 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 TMEM30AQ9NV96 361 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 FAM118AQ9NWS6 357 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 C1RLQ9NZP8 487 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 UBA2Q9UBT2 640 aaPredicted RBP3.28□□□□□ -1.88
SRP54-214ENST00000630962 HAO1Q9UJM8 370 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 LOXL2Q9Y4K0 774 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms