RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 MYCLP1P12525 358 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 ZNF571Q7Z3V5 609 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 GPBAR1Q8TDU6 330 aa25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 NUS1Q96E22 293 aa25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 CMKLR1Q99788 373 aa25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 PHPT1Q9NRX4 125 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 SPATS2LQ9NUQ6 558 aaKnown RBP25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 SCINQ9Y6U3 715 aa25.27■■□□□ 1.64
R3HDM4-208ENST00000626716 SOCS5O75159 536 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 CCNB1P14635 433 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 ITIH1P19827 911 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 HSPA9P38646 679 aaKnown RBP25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 B4GALNT1Q00973 533 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 ZNF235Q14590 738 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 CNGA3Q16281 694 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 CBARPQ8N350 705 aaPredicted RBP25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 PDCD6IPQ8WUM4 868 aaKnown RBP25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 NUDCD1Q96RS6 583 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 TEX101Q9BY14 249 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 CARS2Q9HA77 564 aaKnown RBP25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 PHTF1Q9UMS5 762 aa25.26■■□□□ 1.63
R3HDM4-208ENST00000626716 H3BRJ5 948 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 AGRPO00253 132 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 B4GAT1O43505 415 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 HEXIM1O94992 359 aaKnown RBP25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 PEX11BO96011 259 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 CEACAM5P06731 702 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 LIPCP11150 499 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 CR2P20023 1033 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 AMPD1P23109 780 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 NFKBIAP25963 317 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 VIPR1P32241 457 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 PCK1P35558 622 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 ARL4AP40617 200 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 BOLA3Q53S33 107 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 USP53Q70EK8 1073 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 TMPRSS9Q7Z410 1059 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 PIM3Q86V86 326 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 SLITRK4Q8IW52 837 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 ZNF653Q96CK0 615 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 NAT10Q9H0A0 1025 aaKnown RBP25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 NOD2Q9HC29 1040 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 MRPL47Q9HD33 250 aaKnown RBP25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 SEPT10Q9P0V9 454 aa25.25■■□□□ 1.63
R3HDM4-208ENST00000626716 DDX3XO00571 662 aaKnown RBP eCLIP25.24■■□□□ 1.637e-29■■■□□ 17.7
R3HDM4-208ENST00000626716 FUCA1P04066 466 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 FGF1P05230 155 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 ETV5P41161 510 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 PRKCIP41743 596 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 DPYSL2Q16555 572 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 PHF19Q5T6S3 580 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 DENND2CQ68D51 928 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 TMCO3Q6UWJ1 677 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 POLNQ7Z5Q5 900 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 HEATR4Q86WZ0 1026 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 C17orf82Q86X59 251 aaPredicted RBP25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 NRROSQ86YC3 692 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 PGBD5Q8N414 524 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 ZDHHC1Q8WTX9 485 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 USP7Q93009 1102 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 SGF29Q96ES7 293 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 GSDMCQ9BYG8 508 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 SEMA6CQ9H3T2 930 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 ETNK2Q9NVF9 386 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 TRNAU1APQ9NX07 287 aaKnown RBP25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 MYO1AQ9UBC5 1043 aa25.24■■□□□ 1.63
R3HDM4-208ENST00000626716 PRAMEF33A0A0G2JMD5 474 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 MAFKO60675 156 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 PRAMEF10O60809 474 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 CPNE6O95741 557 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 CPP00450 1065 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 MYBL1P10243 752 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 CYP2A6P11509 494 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 IL1R2P27930 398 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 MAPK10P53779 464 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 MAZP56270 477 aaKnown RBP25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 TYRO3Q06418 890 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 KLHL30Q0D2K2 578 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 ILF3Q12906 894 aaKnown RBP eCLIP25.23■■□□□ 1.634e-9■□□□□ 9.7
R3HDM4-208ENST00000626716 FILIP1LQ4L180 1135 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 CCDC183Q5T5S1 534 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 BBS5Q8N3I7 341 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 TRIM11Q96F44 468 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 DTD2Q96FN9 168 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 MGME1Q9BQP7 344 aa25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 FRMD8Q9BZ67 464 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 SUDS3Q9H7L9 328 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-208ENST00000626716 RHPN2P1A8MT19 583 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 GOLGA6L22H0YM25 854 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 ZW10O43264 779 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 ALDH4A1P30038 563 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 ETV3P41162 512 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 OR1D5P58170 312 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 SRSF6Q13247 344 aaKnown RBP25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 SMTNL2Q2TAL5 461 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 AMZ1Q400G9 498 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 MAP9Q49MG5 647 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 RALGPS1Q5JS13 557 aa25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 E4F1Q66K89 784 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-208ENST00000626716 XKR5Q6UX68 686 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms