RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 UNC5BQ8IZJ1 945 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 TSEN2Q8NCE0 465 aaKnown RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 OR4D9Q8NGE8 314 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 CENPIQ92674 756 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 KIAA1143Q96AT1 154 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 CELF6Q96J87 481 aaKnown RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 SELENOOQ9BVL4 669 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 ASPSCR1Q9BZE9 553 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 PDFQ9HBH1 243 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 KCNK4Q9NYG8 393 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 UTP20O75691 2785 aaKnown RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 SPENQ96T58 3664 aaKnown RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 CLEC18AA5D8T8 446 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CFAP69A5D8W1 941 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 GFPT2O94808 682 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 THRAP10827 490 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 UCHL3P15374 230 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 GM2AP17900 193 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 RFC1P35251 1148 aaPredicted RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 TRIM23P36406 574 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 BCL2L1Q07817 233 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CDC20Q12834 499 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CAMK4Q16566 473 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 DEFB109BQ30KR1 87 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 SNAP47Q5SQN1 464 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CLEC18BQ6UXF7 455 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 DPPA4Q7L190 304 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 HEATR4Q86WZ0 1026 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 C17orf82Q86X59 251 aaPredicted RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CLEC18CQ8NCF0 446 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 NUS1Q96E22 293 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 ABHD17AQ96GS6 310 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CTRCQ99895 268 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 TUBGCP2Q9BSJ2 902 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 CINPQ9BW66 212 aaPredicted RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 NAA15Q9BXJ9 866 aaKnown RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 LRRC4CQ9HCJ2 640 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 PHPT1Q9NRX4 125 aaPredicted RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 NOCTQ9UK39 431 aaKnown RBP14.69□□□□□ -0.06
PNKP-218ENST00000625299 SUFUQ9UMX1 484 aa14.69□□□□□ -0.06
PNKP-218ENST00000625299 IGHV1OR21-1A0A087WYE8 117 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 A8MU76 341 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 PPM1DO15297 605 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 CAPN5O15484 640 aaPredicted RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 CCP110O43303 1012 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 PRAMEF11O60813 436 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 PALMO75781 387 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 CYP1A1P04798 512 aaPredicted RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 CEACAM5P06731 702 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 OAS2P29728 719 aaKnown RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 GPR3P46089 330 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 RAB15P59190 212 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 TPI1P60174 286 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 FMO1Q01740 532 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 CDR2Q01850 454 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 LACTB2Q53H82 288 aaPredicted RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 MIIPQ5JXC2 388 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 ATP1A1-AS1Q5TC04 95 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 AFMIDQ63HM1 303 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 HIST2H2BCQ6DN03 193 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 C16orf46Q6P387 395 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 DOK6Q6PKX4 331 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 KDELC2Q7Z4H8 507 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 ZNF761Q86XN6 746 aaPredicted RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 NLGN4XQ8N0W4 816 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 NAGSQ8N159 534 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 NLGN4YQ8NFZ3 816 aaPredicted RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 PTCD2Q8WV60 388 aaKnown RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 AHCYL2Q96HN2 611 aaKnown RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 SLC45A3Q96JT2 553 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 PSMG3-AS1Q96PY0 264 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 STK33Q9BYT3 514 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 B4GALT6Q9UBX8 382 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 FZD10Q9ULW2 581 aa14.68□□□□□ -0.06
PNKP-218ENST00000625299 SPTBN1Q01082 2364 aaKnown RBP14.68□□□□□ -0.06
PNKP-218ENST00000625299 NOTCH2Q04721 2471 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 USP9XQ93008 2570 aaPredicted RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 LOC101059948A0A1B0GTJ6 334 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 PRR19A6NJB7 356 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 WASH4PA8MWX3 477 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 B4E171 279 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 MTSS1O43312 755 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 FUCA1P04066 466 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 TSPAN7P41732 249 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 ACTR1BP42025 376 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 NSFP46459 744 aaKnown RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 POLD2P49005 469 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 PAPOLAP51003 745 aaKnown RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 ACTR1AP61163 376 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 POLR2LP62875 67 aaKnown RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 CTBSQ01459 385 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 SEPT6Q14141 434 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 WDR59Q6PJI9 974 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 ATCAYQ86WG3 371 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 ZNF677Q86XU0 584 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms