RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MIEF1Q9NQG6 463 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 AHSPQ9NZD4 102 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 FKBPLQ9UIM3 349 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 NUMA1Q14980 2115 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A9O60656 530 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SUN1O94901 812 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 TPBGLP0DKB5 382 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A6P19224 532 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 NR1D1P20393 614 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A1P22309 533 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A4P22310 534 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CTHP32929 405 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A3P35503 534 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A5P35504 534 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SLC6A11P48066 632 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CLCN4P51793 760 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 PLIN5Q00G26 463 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 TP53BP2Q13625 1128 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 NOMO1Q15155 1222 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SPANXN3Q5MJ09 141 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SLC36A4Q6YBV0 504 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CACNA2D3Q8IZS8 1091 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 NCSTNQ92542 709 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 IGSF8Q969P0 613 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CEP295NLQ96MC4 621 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 DTLQ9NZJ0 730 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 COQ6Q9Y2Z9 468 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 RNGTTO60942 597 aaKnown RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 GCATO75600 419 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 MT-CO1P00395 513 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 RPL10P27635 214 aaKnown RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 DUSP3P51452 185 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 TBX2Q13207 712 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 NFATC2Q13469 925 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 DBN1Q16643 649 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 FAM182AQ5T1J6 154 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 C16orf46Q6P387 395 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CRTC1Q6UUV9 634 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 RRM2BQ7LG56 351 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 LDB1Q86U70 411 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 GPSM1Q86YR5 675 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CAMKK1Q8N5S9 505 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 HES6Q96HZ4 224 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SLC22A12Q96S37 553 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 NOD2Q9HC29 1040 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 MED4Q9NPJ6 270 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CCL26Q9Y258 94 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 AHCTF1Q8WYP5 2266 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 K7ERQ8 282 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 PPFIA2O75334 1257 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 CYP7B1O75881 506 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 JUNDP17535 347 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 ITGAXP20702 1163 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SATB1Q01826 763 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 STX3Q13277 289 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 ZBTB6Q15916 424 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 KCTD19Q17RG1 926 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-229ENST00000622668 HGSNATQ68CP4 663 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 UBALD2Q8IYN6 164 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 OR2T3Q8NH03 318 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 ATL1Q8WXF7 558 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 TUBGCP3Q96CW5 907 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 SRMSQ9H3Y6 488 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 RIC8BQ9NVN3 520 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 B4GALT6Q9UBX8 382 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 PRKAB1Q9Y478 270 aa9.09□□□□□ -0.95
HDAC9-229ENST00000622668 FAM95CA0A1B0GW59 222 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 IQCF5A8MTL0 148 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 C2CD4DB7Z1M9 353 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 KRT6AP02538 564 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 KRT6BP04259 564 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CYP17A1P05093 508 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 HNRNPH3P31942 346 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CTSOP43234 321 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 KRT6CP48668 564 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 VSNL1P62760 191 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 RPS21P63220 83 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF234Q14588 700 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 LYPLAL1Q5VWZ2 237 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 SLC26A11Q86WA9 606 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 GKN2Q86XP6 184 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 APCDD1Q8J025 514 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF567Q8N184 647 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CXorf38Q8TB03 319 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 CAPS2Q9BXY5 557 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 INTS7Q9NVH2 962 aaKnown RBP9.08□□□□□ -0.96
HDAC9-229ENST00000622668 OPTCQ9UBM4 332 aa9.08□□□□□ -0.96
HDAC9-229ENST00000622668 L3MBTL1Q9Y468 752 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms