RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CCL22O00626 93 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 POLR3GO15318 223 aaPredicted RBP17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 ALDH1A2O94788 518 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 VAPBO95292 243 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 LHCGRP22888 699 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 HMGCLP35914 325 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 P2RY2P41231 377 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 FZD5Q13467 585 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 ARHGEF7Q14155 803 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 FRG1Q14331 258 aaKnown RBP17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 STAT4Q14765 748 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 CRY1Q16526 586 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 KIAA0930Q6ICG6 404 aaPredicted RBP17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 AADATQ8N5Z0 425 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 FLCNQ8NFG4 579 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 PBXIP1Q96AQ6 731 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 CERS2Q96G23 380 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 RUFY1Q96T51 708 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 CYTH2Q99418 400 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 BPIFA1Q9NP55 256 aa17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 NLE1Q9NVX2 485 aaPredicted RBP17.83■□□□□ 0.44
PTCHD3-202ENST00000622555 EXOC1LA0A1B0GW35 172 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 CHURC1-FNTBB4DL54 471 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 RPP40O75818 363 aaKnown RBP17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 PIAS1O75925 651 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 DNTTP04053 509 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 ERVK-10P10266 1014 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 DRD3P35462 400 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 MMP12P39900 470 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 SUOXP51687 545 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 ARSDP51689 593 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 PRAMEP78395 509 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 ELP6Q0PNE2 266 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 EFTUD2Q15029 972 aaKnown RBP eCLIP17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 KBTBD12Q3ZCT8 623 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 LRIG3Q6UXM1 1119 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 TRIM67Q6ZTA4 783 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 DPPA4Q7L190 304 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 KCNMB4Q86W47 210 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 RASSF3Q86WH2 238 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 HDDC3Q8N4P3 179 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 GANCQ8TET4 914 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 EID2BQ96D98 161 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 SH3GL2Q99962 352 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 IL17CQ9P0M4 197 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 ITM2BQ9Y287 266 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 NFS1Q9Y697 457 aa17.82■□□□□ 0.44
PTCHD3-202ENST00000622555 LRRK1Q38SD2 2015 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 A0A1W2PP55 124 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ATG13O75143 517 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ZNF30P17039 623 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ACVR1Q04771 509 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 MGAT5Q09328 741 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 KLHL38Q2WGJ6 581 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 PIP5KL1Q5T9C9 394 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 PDPK2PQ6A1A2 396 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 CYS1Q717R9 158 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 CTAGE3PQ8IX95 158 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 PJA1Q8NG27 643 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 OR6P1Q8NGX9 317 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 HDAC10Q969S8 669 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SIPA1Q96FS4 1042 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 TBATAQ96M53 351 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 OMDQ99983 421 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 GGT7Q9UJ14 662 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 TRIOO75962 3097 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ZNF106Q9H2Y7 1883 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 FAM159BA6NKW6 160 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 GOLGA8KD6RF30 607 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 GOLGA8TH3BQL2 631 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 NEMP1O14524 444 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 RNASEH2AO75792 299 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ARNTP27540 789 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 HADHAP40939 763 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 ARCN1P48444 511 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 DGKEP52429 567 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 CCDC15Q0P6D6 951 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 RALGDSQ12967 914 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 TTC31Q49AM3 519 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 HSP90B2PQ58FF3 399 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 HSP90AA5PQ58FG0 334 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 KIAA1324Q6UXG2 1013 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SYT13Q7L8C5 426 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 CDKL2Q92772 493 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 RAB7BQ96AH8 199 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 MRRFQ96E11 262 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 CDKN2AIPNLQ96HQ2 116 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 MRGPRX1Q96LB2 322 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SUDS3Q9H7L9 328 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 POLMQ9NP87 494 aaPredicted RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SMYD2Q9NRG4 433 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 FBXL12Q9NXK8 326 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SERGEFQ9UGK8 458 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 FKBPLQ9UIM3 349 aa17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 FNDC3AQ9Y2H6 1198 aaKnown RBP17.81■□□□□ 0.44
PTCHD3-202ENST00000622555 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms