RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ITCHQ96J02 903 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 C3orf30Q96M34 536 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 IL22Q9GZX6 179 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 LRRC40Q9H9A6 602 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 MRPL40Q9NQ50 206 aaKnown RBP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 PDGFCQ9NRA1 345 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 BFARQ9NZS9 450 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 TMEM9Q9P0T7 183 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 HSPA1AP0DMV8 641 aaKnown RBP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 HSPA1BP0DMV9 641 aaKnown RBP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 CCND2P30279 289 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 MAGEA12P43365 314 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 CCNA1P78396 465 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 PLIN5Q00G26 463 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 C12orf42Q96LP6 360 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 TMEM74Q96NL1 305 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 COL11A1P12107 1806 aaPredicted RBP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 TRPC5OSA6NMA1 111 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 PGK1P00558 417 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 LCP1P13796 627 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 NAMPTP43490 491 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 GRSF1Q12849 480 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 SPANXN3Q5MJ09 141 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 NOL9Q5SY16 702 aaKnown RBP21.75■■□□□ 1.07
PCSK6-220ENST00000622483 EEF1DP3Q658K8 133 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 C1orf127Q8N9H9 656 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 RNF149Q8NC42 400 aa21.75■■□□□ 1.07
PCSK6-220ENST00000622483 CCL15-CCL14A0A0B4J2E2 113 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 A0A0G2JLL6 359 aaPredicted RBP21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SOWAHBA6NEL2 793 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 H0YCG3 227 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 M0R3G1 203 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 NOBOXO60393 691 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 TCF3P15923 654 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 CCL15Q16663 113 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 AMHR2Q16671 573 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 GTF2IRD2BQ6EKJ0 949 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 PRRT2Q7Z6L0 340 aaPredicted RBP21.74■■□□□ 1.07
PCSK6-220ENST00000622483 GTF2IRD2Q86UP8 949 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SPARTQ8N0X7 666 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SLC25A23Q9BV35 468 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 PDZD7Q9H5P4 517 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 CMTM6Q9NX76 183 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 MAP10Q9P2G4 905 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 TRIM64A6NGJ6 449 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 H3BMM5 538 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 KCNA2P16389 499 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 ITGB6P18564 788 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 ADSLP30566 484 aaPredicted RBP21.74■■□□□ 1.07
PCSK6-220ENST00000622483 RACK1P63244 317 aaKnown RBP21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SQLEQ14534 574 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 FAM83EQ2M2I3 478 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 FBXO48Q5FWF7 155 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 TMTC4Q5T4D3 741 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 ARHGAP17Q68EM7 881 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SLC16A12Q6ZSM3 486 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 STK32CQ86UX6 486 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 STYXQ8WUJ0 223 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 VPS33AQ96AX1 596 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 CENPOQ9BU64 300 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 SPC25Q9HBM1 224 aa21.74■■□□□ 1.07
PCSK6-220ENST00000622483 MTF2Q9Y483 593 aaPredicted RBP21.74■■□□□ 1.07
PCSK6-220ENST00000622483 A0A0J9YYE9 177 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 A8MV72 311 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 SLC22A2O15244 555 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CPNE6O95741 557 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 AHSGP02765 367 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CCDC81Q6ZN84 652 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CATSPER4Q7RTX7 472 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ACOT1Q86TX2 421 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ZNF641Q96N77 438 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ACOT9Q9Y305 439 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 IFT52Q9Y366 437 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 RAD54BQ9Y620 910 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 PPP6CO00743 305 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 SNPHO15079 494 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 H2AFYO75367 372 aaKnown RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 MFN2O95140 757 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 PITX1P78337 314 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 FAM214AQ32MH5 1076 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 XKR3Q5GH77 459 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.73■■□□□ 1.077e-6■□□□□ 9.5
PCSK6-220ENST00000622483 PPP1R26Q5T8A7 1209 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ADCK1Q86TW2 530 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 MMAAQ8IVH4 418 aaKnown RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 MFSD6LQ8IWD5 586 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 REM2Q8IYK8 340 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 DEPDC4Q8N2C3 294 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 TOP1MTQ969P6 601 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ADAMTS5Q9UNA0 930 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 TRIM64BA6NI03 449 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 INO80B-WBP1J3KQ70 363 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 TAF4O00268 1085 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 PDHXO00330 501 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CILPO75339 1184 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 ALDOCP09972 364 aaKnown RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 MLNP12872 115 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 HABP4Q5JVS0 413 aaKnown RBP21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CUZD1Q86UP6 607 aa21.73■■□□□ 1.07
PCSK6-220ENST00000622483 CALML6Q8TD86 181 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms