RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 FKBPLQ9UIM3 349 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 FBXO10Q9UK96 956 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 PKP3Q9Y446 797 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 MYO9BQ13459 2157 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 A0A0U1RQS6 177 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 POP4O95707 220 aaKnown RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 SP100P23497 879 aaPredicted RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 NNMTP40261 264 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 RECQLP46063 649 aaPredicted RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 HECTD2Q5U5R9 776 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 SYCE2Q6PIF2 218 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 Q6ZVU0 165 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 LYSMD3Q7Z3D4 306 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 WFIKKN2Q8TEU8 576 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 KCTD4Q8WVF5 259 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 CIPCQ9C0C6 399 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 EBF3Q9H4W6 596 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 THG1LQ9NWX6 298 aaKnown RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 FNDC3AQ9Y2H6 1198 aaKnown RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 A0A087X1B8 175 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 A0A0J9YYE9 177 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 KLF11O14901 512 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 TRBC1P01850 177 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 COL6A2P12110 1019 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 ALDH3A1P30838 453 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 MC4RP32245 332 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 IFT88Q13099 833 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 DPY19L3Q6ZPD9 716 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 LCA5Q86VQ0 697 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 RAB3IL1Q8TBN0 382 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 SORCS1Q8WY21 1168 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 THOC1Q96FV9 657 aaKnown RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 SCYL1Q96KG9 808 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 SUV39H2Q9H5I1 410 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 NMRAL1Q9HBL8 299 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 OBP2AQ9NY56 170 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 RUVBL2Q9Y230 463 aaKnown RBP21.46■■□□□ 1.03
SPAST-204ENST00000621856 CRYL1Q9Y2S2 319 aa21.46■■□□□ 1.03
SPAST-204ENST00000621856 TRANK1O15050 2925 aa21.45■■□□□ 1.03
SPAST-204ENST00000621856 CISD3P0C7P0 127 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 PRSS56P0CW18 603 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 STC1P52823 247 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 PCLAFQ15004 111 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 TYSND1Q2T9J0 566 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 FAM45BPQ6NSW5 357 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 C12orf40Q86WS4 652 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 TDHQ8IZJ6 230 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 TTC8Q8TAM2 541 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 FAM45AQ8TCE6 357 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 OLFM1Q99784 485 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 C1QTNF1Q9BXJ1 281 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 CPEB1Q9BZB8 566 aaKnown RBP21.45■■□□□ 1.02
SPAST-204ENST00000621856 TRPV4Q9HBA0 871 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 INTS10Q9NVR2 710 aaKnown RBP21.45■■□□□ 1.02
SPAST-204ENST00000621856 COPG2Q9UBF2 871 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 MID2Q9UJV3 735 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 CDH7Q9ULB5 785 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 CORO1CQ9ULV4 474 aaPredicted RBP21.45■■□□□ 1.02
SPAST-204ENST00000621856 SLC8A2Q9UPR5 921 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 ARL2BPQ9Y2Y0 163 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 VWA7Q9Y334 891 aa21.45■■□□□ 1.02
SPAST-204ENST00000621856 C1orf232A0A0U1RR37 186 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 TULP3O75386 442 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 APOA4P06727 396 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 BMP1P13497 986 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 CPA3P15088 417 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 KCNA4P22459 653 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 ZRANB3Q5FWF4 1079 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 TBC1D1Q86TI0 1168 aaPredicted RBP21.44■■□□□ 1.02
SPAST-204ENST00000621856 ZFYVE1Q9HBF4 777 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 ZFP14Q9HCL3 533 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 IL17CQ9P0M4 197 aa21.44■■□□□ 1.02
SPAST-204ENST00000621856 PRRC2BQ5JSZ5 2229 aaKnown RBP21.44■■□□□ 1.02
SPAST-204ENST00000621856 CAPN8A6NHC0 703 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 NDUFS3O75489 264 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 ASLP04424 464 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 ATP5BP06576 529 aaKnown RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 TROVE2P10155 538 aaKnown RBP eCLIP21.43■■□□□ 1.02
SPAST-204ENST00000621856 FCARP24071 287 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 HNF1BP35680 557 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 HMGCLP35914 325 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 BST1Q10588 318 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 PDGFRLQ15198 375 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 TANGO2Q6ICL3 276 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 C6orf89Q6UWU4 347 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 ZSWIM9Q86XI8 627 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 C10orf107Q8IVU9 208 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 TNS4Q8IZW8 715 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 CHST14Q8NCH0 376 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 MRGPRX3Q96LB0 322 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 UBA6A0AVT1 1052 aaPredicted RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 TTC34A8MYJ7 566 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 PFDN6O15212 129 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 DNAJC6O75061 913 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 KIAA0754O94854 1291 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 UGT2B4P06133 528 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 HOXB8P17481 243 aaPredicted RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 OVGP1Q12889 678 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 STX3Q13277 289 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 TSNAXIP1Q2TAA8 658 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms