RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ZKSCAN5Q9Y2L8 839 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 KNL1Q8NG31 2342 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 A0A1B0GTQ1 180 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 LOC285095A0A1B0GVY8 99 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 GOLGA8CPA6NN73 597 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 TM4SF5O14894 197 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 GCATO75600 419 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 EPOP01588 193 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 PCCBP05166 539 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 STIP1P31948 543 aaKnown RBP18.29■□□□□ 0.52
LITAF-220ENST00000620789 ETV3P41162 512 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 TNNT3P45378 269 aaPredicted RBP18.29■□□□□ 0.52
LITAF-220ENST00000620789 ID4P47928 161 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 CCT8P50990 548 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 GEMP55040 296 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 YPEL5P62699 121 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 PTSQ03393 145 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 MTM1Q13496 603 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 PRPSAP1Q14558 356 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 CCNG2Q16589 344 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 LONRF2Q1L5Z9 754 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 PRAMEF14Q5SWL7 426 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 ARHGEF18Q6ZSZ5 1173 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 IPMKQ8NFU5 416 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 RTP4Q96DX8 246 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 DTD2Q96FN9 168 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 PPP1R2P1Q96PQ5 205 aa18.29■□□□□ 0.52
LITAF-220ENST00000620789 C1orf232A0A0U1RR37 186 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 SPTY2D1-AS1A0A0U1RR47 76 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 CLDN7O95471 211 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 C1SP09871 688 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 ATXN1LP0C7T5 689 aaKnown RBP18.28■□□□□ 0.52
LITAF-220ENST00000620789 CD59P13987 128 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 ARRB1P49407 418 aaPredicted RBP18.28■□□□□ 0.52
LITAF-220ENST00000620789 STC1P52823 247 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 SNX1Q13596 522 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 PDE1CQ14123 709 aaPredicted RBP18.28■□□□□ 0.52
LITAF-220ENST00000620789 INPP5AQ14642 412 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 PUM1Q14671 1186 aaKnown RBP eCLIP18.28■□□□□ 0.52
LITAF-220ENST00000620789 CDKN3Q16667 212 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 TPRG1LQ5T0D9 272 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 ESRP1Q6NXG1 681 aaKnown RBP18.28■□□□□ 0.52
LITAF-220ENST00000620789 Q6ZVL8 140 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 TECPR1Q7Z6L1 1165 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 RASGEF1CQ8N431 466 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 PLA2G15Q8NCC3 412 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 FSD1LQ9BXM9 530 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 MAGEE1Q9HCI5 957 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 ZNF148Q9UQR1 794 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 AAR2Q9Y312 384 aaKnown RBP18.28■□□□□ 0.52
LITAF-220ENST00000620789 PCDHGB2Q9Y5G2 931 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 DCHS1Q96JQ0 3298 aa18.28■□□□□ 0.52
LITAF-220ENST00000620789 YKT6O15498 198 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 ITGAVP06756 1048 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 PIRTP0C851 137 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 HLA-DPA1P20036 260 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 RXRGP48443 463 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 THOP1P52888 689 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 GNG11P61952 73 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 IL9RQ01113 521 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 PTK2BQ14289 1009 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 FZD2Q14332 565 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 SHBQ15464 509 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 SLC1A5Q15758 541 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 PARP6Q2NL67 630 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 P3H1Q32P28 736 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 SIRPB2Q5JXA9 342 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 DRICH1Q6PGQ1 229 aaPredicted RBP18.27■□□□□ 0.52
LITAF-220ENST00000620789 RAVER1Q8IY67 606 aaKnown RBP18.27■□□□□ 0.52
LITAF-220ENST00000620789 SRPK1Q96SB4 655 aaKnown RBP18.27■□□□□ 0.52
LITAF-220ENST00000620789 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 KCND1Q9NSA2 647 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 TTC7AQ9ULT0 858 aaPredicted RBP18.27■□□□□ 0.52
LITAF-220ENST00000620789 SNX12Q9UMY4 172 aa18.27■□□□□ 0.52
LITAF-220ENST00000620789 ASCC3Q8N3C0 2202 aaKnown RBP18.26■□□□□ 0.51
LITAF-220ENST00000620789 PCDHGA12O60330 932 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 EPHA8P29322 1005 aaPredicted RBP18.26■□□□□ 0.51
LITAF-220ENST00000620789 CHRNA4P43681 627 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 DPTQ07507 201 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 PNCKQ6P2M8 343 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 MACC1Q6ZN28 852 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 RFLNAQ6ZTI6 216 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 ZNF765Q7L2R6 523 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 LYSMD3Q7Z3D4 306 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 PARGQ86W56 976 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 KLHDC8BQ8IXV7 354 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 SLC25A41Q8N5S1 370 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 CCHCR1Q8TD31 782 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 APOOQ9BUR5 198 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 FICDQ9BVA6 458 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 ZFYVE1Q9HBF4 777 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 HOMER3Q9NSC5 361 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 CD84Q9UIB8 345 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 DRG1Q9Y295 367 aaKnown RBP18.26■□□□□ 0.51
LITAF-220ENST00000620789 ZNF711Q9Y462 761 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 OR1A2Q9Y585 309 aa18.26■□□□□ 0.51
LITAF-220ENST00000620789 GOLGA6CA6NDK9 693 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 GOLGA6BA6NDN3 693 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 K7ESM1 405 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms