RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZCWPW2Q504Y3 356 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF618Q5T7W0 954 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ANXA8L1Q5VT79 327 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 C11orf88Q6PI97 169 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CLEC4DQ8WXI8 215 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 AP2M1Q96CW1 435 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 SPRTNQ9H040 489 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 SEMA6AQ9H2E6 1030 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 PDP2Q9P2J9 529 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ITGAXP20702 1163 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ADRA1BP35368 520 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 BUD31P41223 144 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CACNG1Q06432 222 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 POTEHQ6S545 545 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 C12orf56Q8IXR9 622 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 OR4K2Q8NGD2 314 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 HEPHQ9BQS7 1158 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 C1orf50Q9BV19 199 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 BRINP2Q9C0B6 783 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 COL20A1Q9P218 1284 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 TRIM43BA6NCK2 446 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 AP3D1O14617 1153 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 FPGTO14772 594 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 RECQL5O94762 991 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 FSHRP23945 695 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CMPK1P30085 196 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 PKNOX1P55347 436 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TLE2Q04725 743 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ADHFE1Q8IWW8 467 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TSTD1Q8NFU3 115 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MCMBPQ9BTE3 642 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 C3orf14Q9HBI5 128 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 LEF1Q9UJU2 399 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 GPR25O00155 361 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TEX28O15482 410 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 C4BPAP04003 597 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CFIP05156 583 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TFPIP10646 304 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MARCKSL1P49006 195 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CERCAMQ5T4B2 595 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TAPT1Q6NXT6 567 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CCDC185Q8N715 623 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 DQX1Q8TE96 717 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 BRI3BPQ8WY22 251 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 REXO4Q9GZR2 422 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 DCLRE1BQ9H816 532 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 OSER1Q9NX31 292 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 FBXO5Q9UKT4 447 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TPRKBQ9Y3C4 175 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ST13P50502 369 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 PTPN20Q4JDL3 420 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 HDDC3Q8N4P3 179 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 CPXM1Q96SM3 734 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 SLC38A3Q99624 504 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MYLK2Q9H1R3 596 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 PRKAB1Q9Y478 270 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 POLR3HQ9Y535 204 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 PCDHB1Q9Y5F3 818 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 A0A1B0GVM2 712 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MFSD11O43934 449 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 NBNO60934 754 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 POP4O95707 220 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 WARSP23381 471 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 MANFP55145 182 aaKnown RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 INO80DQ53TQ3 878 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-219ENST00000620786 IRGCQ6NXR0 463 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ADCY4Q8NFM4 1077 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF354BQ96LW1 612 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 FNDC11Q9BVV2 318 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 KCNK4Q9NYG8 393 aa11.38□□□□□ -0.59
CLIP1-219ENST00000620786 EPHB6O15197 1021 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SLC31A1O15431 190 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ZCCHC18P0CG32 403 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 TSHRP16473 764 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 FOXM1Q08050 763 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 DLK2Q6UY11 383 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 TCAIMQ8N3R3 496 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 RDH11Q8TC12 318 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ITCHQ96J02 903 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CSPG4P5Q96PW8 444 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PANX1Q96RD7 426 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 RACGAP1Q9H0H5 632 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 BATF3Q9NR55 127 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SNX15Q9NRS6 342 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PCYOX1Q9UHG3 505 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 MTF2Q9Y483 593 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ABHD14A-ACY1A0A1B0GW23 586 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CLOCKO15516 846 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 AP5Z1O43299 807 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms