RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC2A6Q9UGQ3 507 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SCML1Q9UN30 329 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SIT1Q9Y3P8 196 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ARL5AQ9Y689 179 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 MYO18AQ92614 2054 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 A0A087WUV0 522 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 C1orf232A0A0U1RR37 186 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 NPIPB15A6NHN6 443 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 A8MX80 341 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 MAP2K7O14733 419 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 AREL1O15033 823 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 MID1O15344 667 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 STX7O15400 261 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ATP8B1O43520 1251 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CLDN7O95471 211 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 DNTTP04053 509 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 NUDT17P0C025 328 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ADRB3P13945 408 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 PAMP19021 973 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 VIPR1P32241 457 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 DRD3P35462 400 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 P2RY2P41231 377 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 RPS9P46781 194 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 NEK3P51956 506 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 DGKEP52429 567 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF140P52738 457 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 SEMG2Q02383 582 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ACVR1Q04771 509 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 SIGLEC14Q08ET2 396 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CNTN1Q12860 1018 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 PTPRCAPQ14761 206 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 STAT4Q14765 748 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CRYMQ14894 314 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 TMEM52BQ4KMG9 183 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 UBAP2Q5T6F2 1119 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ERAP2Q6P179 960 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 TRMT10BQ6PF06 316 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 TRIM67Q6ZTA4 783 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 DPPA4Q7L190 304 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 LYSMD3Q7Z3D4 306 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 GLT6D1Q7Z4J2 308 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 TSPAN33Q86UF1 283 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 RAVER1Q8IY67 606 aaKnown RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 AADATQ8N5Z0 425 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 PJA1Q8NG27 643 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 OR13J1Q8NGT2 312 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 GSDMBQ8TAX9 411 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 FBF1Q8TES7 1133 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 HDAC10Q969S8 669 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 FAM131CQ96AQ9 280 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF669Q96BR6 464 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ERLEC1Q96DZ1 483 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CDKN2AIPNLQ96HQ2 116 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 MRGPRX1Q96LB2 322 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 TBATAQ96M53 351 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CCDC77Q9BR77 488 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 VIPAS39Q9H9C1 493 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 NLE1Q9NVX2 485 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 POLR3BQ9NW08 1133 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-209ENST00000620393 FBXL12Q9NXK8 326 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 IL17CQ9P0M4 197 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF711Q9Y462 761 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 NFS1Q9Y697 457 aa8.03□□□□□ -1.12
CPNE3-209ENST00000620393 A0A0U1RQS6 177 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 TCRBV9S1A1TA0A576 114 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 CCDC78A2IDD5 438 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 RGSL1A5PLK6 1076 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 C3orf80F5H4A9 247 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 H0Y858 1186 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 PLK4O00444 970 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SLC7A4O43246 635 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SPINT1O43278 529 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 DCXO43602 365 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 BUD23O43709 281 aaKnown RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 AP1G1O43747 822 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 TCEA3O75764 348 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 RPP40O75818 363 aaKnown RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 VAPBO95292 243 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 C1QAP02745 245 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF30P17039 623 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 GABRG2P18507 467 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LHCGRP22888 699 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 STX2P32856 288 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 HADHAP40939 763 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ARSDP51689 593 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 STC1P52823 247 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 EIF3BP55884 814 aaKnown RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 TMPRSS15P98073 1019 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 CREB5Q02930 508 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 KCNC4Q03721 635 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 MGAT5Q09328 741 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ELP6Q0PNE2 266 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 RALGDSQ12967 914 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms