RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KIAA0408Q6ZU52 694 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 HPS6Q86YV9 775 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 MAB21L3Q8N8X9 362 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 RDH11Q8TC12 318 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 ZNF334Q9HCZ1 680 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 SARS2Q9NP81 518 aaKnown RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 A0A088AWK7 358 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 A0A1B0GVM2 712 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 TCAF2A6NFQ2 919 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 SOD2P04179 222 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 ALOX15P16050 662 aaPredicted RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 CTPS1P17812 591 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 GNAZP19086 355 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 ARF5P84085 180 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 CYTH1Q15438 398 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 DNAL1Q4LDG9 190 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 ACAD11Q709F0 780 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 SCG3Q8WXD2 468 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 PTERQ96BW5 349 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 CMTM5Q96DZ9 223 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 ZNF558Q96NG5 402 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 PSKH2Q96QS6 385 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 SMG9Q9H0W8 520 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 STN1Q9H668 368 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 CDYLQ9Y232 598 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 RAI2Q9Y5P3 530 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 ANAPC1Q9H1A4 1944 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 RPP40O75818 363 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 IPO13O94829 963 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 CXCL10P02778 98 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 URODP06132 367 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
CIITA-212ENST00000618207 TBCCQ15814 346 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 PPP1R3AQ16821 1122 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 C6orf163Q5TEZ5 329 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 MRNIPQ6NTE8 343 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 KDM1BQ8NB78 822 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 PDZD8Q8NEN9 1154 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 RANBP9Q96S59 729 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 PCDHB9Q9Y5E1 797 aa12.42□□□□□ -0.42
CIITA-212ENST00000618207 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 KDELR3O43731 214 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 OR1I1O60431 355 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 H2AFYO75367 372 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 TMCC1O94876 653 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PAPSS2O95340 614 aaPredicted RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 CKMP06732 381 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PIK3R1P27986 724 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PFKFB4Q16877 469 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 MUM1Q2TAK8 710 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 ZRANB3Q5FWF4 1079 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 CXorf57Q6NSI4 855 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 TRIM74Q86UV6 250 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 TRIM73Q86UV7 250 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 NRG4Q8WWG1 115 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 ESAMQ96AP7 390 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 TSPAN17Q96FV3 270 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 FKBPLQ9UIM3 349 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 CPQQ9Y646 472 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 UBXN8O00124 270 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 RHOBTB1O94844 696 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 ABLIM3O94929 683 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PRAMEF12O95522 483 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PRLP01236 227 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 ENO3P13929 434 aaPredicted RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 ITGAXP20702 1163 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 KPNA2P52292 529 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 CDH18Q13634 790 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 NAA25Q14CX7 972 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 TMEM150AQ86TG1 271 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 ISCA2Q86U28 154 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 SLC26A7Q8TE54 656 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 TADA1Q96BN2 335 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 TMA16Q96EY4 203 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 CDK5RAP1Q96SZ6 601 aaKnown RBP12.41□□□□□ -0.42
CIITA-212ENST00000618207 GALPQ9UBC7 116 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 OGDHLQ9ULD0 1010 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 SORCS3Q9UPU3 1222 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 MYO9BQ13459 2157 aa12.41□□□□□ -0.42
CIITA-212ENST00000618207 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 H3BMM5 538 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 TEX28O15482 410 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 SRP72O76094 671 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 ALPIP09923 528 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms