RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 ETNK2Q9NVF9 386 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 OR12D3Q9UGF7 316 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CPA4Q9UI42 421 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 HBS1LQ9Y450 684 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 EME2A4GXA9 379 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 MID1O15344 667 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 TRBC1P01850 177 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 MANFP55145 182 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZNF548Q8NEK5 533 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 OR52K2Q8NGK3 314 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 PMEPA1Q969W9 287 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 FEM1CQ96JP0 617 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZNF285Q96NJ3 590 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ELOVL4Q9GZR5 314 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZNF350Q9GZX5 532 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 IMP3Q9NV31 184 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 PDP1Q9P0J1 537 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 MALT1Q9UDY8 824 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFX3-212ENST00000617270 SAMD4AQ9UPU9 718 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 USP20Q9Y2K6 914 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CDC42BPGQ6DT37 1551 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 NLRP1Q9C000 1473 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SLC28A1O00337 649 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SMAD9O15198 467 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 OTCP00480 354 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 RARAP10276 462 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CTPS1P17812 591 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 NPR2P20594 1047 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ITPKAP23677 461 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 MIPP30301 263 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SSR2P43308 183 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 KCNJ2P63252 427 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 FOXO4P98177 505 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 BMT2Q1RMZ1 405 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SLC30A6Q6NXT4 461 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 TXNDC11Q6PKC3 985 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SV2AQ7L0J3 742 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 BEND5Q7L4P6 421 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ALYREFQ86V81 257 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZMIZ2Q8NF64 920 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 KCTD4Q8WVF5 259 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 EMID1Q96A84 441 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 S100PBPQ96BU1 408 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 AARSD1Q9BTE6 412 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 SPATA9Q9BWV2 254 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ELAC1Q9H777 363 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 NOL11Q9H8H0 719 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 C11orf16Q9NQ32 467 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 MRPS33Q9Y291 106 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 GCC2Q8IWJ2 1684 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 E5RJQ4 531 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 KCNQ2O43526 872 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 HSD3B1P14060 373 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SNRPD1P62314 119 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 CPTPQ5TA50 214 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 AHSA2Q719I0 299 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 FUKQ8N0W3 1084 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 LRRC20Q8TCA0 184 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 TCF25Q9BQ70 676 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 BRINP2Q9C0B6 783 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 GCATO75600 419 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 PIAS1O75925 651 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 AMHP03971 560 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 AP3S2P59780 193 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 LIPEQ05469 1076 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 PRKG2Q13237 762 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CA9Q16790 459 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SLC5A9Q2M3M2 681 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SBK1Q52WX2 424 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZC3H12AQ5D1E8 599 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 QSOX2Q6ZRP7 698 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 FRMD7Q6ZUT3 714 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 LINGO2Q7L985 606 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZNF606Q8WXB4 792 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 BORCS5Q969J3 196 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 MTMR8Q96EF0 704 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CCDC120Q96HB5 630 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 KLHL5Q96PQ7 755 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ZNF471Q9BX82 626 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 IDI2Q9BXS1 227 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 IL22Q9GZX6 179 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 KANSL3Q9P2N6 904 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 RGS17Q9UGC6 210 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 MRTO4Q9UKD2 239 aaKnown RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 TRIM17Q9Y577 477 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ASTN2O75129 1339 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 CDK12Q9NYV4 1490 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 APOC4-APOC2K7ER74 178 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 APOC2P02655 101 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CSH1P0DML2 217 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 CSH2P0DML3 217 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 TTPAP49638 278 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SEMA5AQ13591 1074 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 DNASE1L3Q13609 305 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 ACVR2BQ13705 512 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 SIM2Q14190 667 aaPredicted RBP6.01□□□□□ -1.45
RFX3-212ENST00000617270 FAM151BQ6UXP7 276 aa6.01□□□□□ -1.45
RFX3-212ENST00000617270 DENND1CQ8IV53 801 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms