RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 IGSF6O95976 241 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PSMA1P25786 263 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 IDH3AP50213 366 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 LIPEQ05469 1076 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 CYP1B1Q16678 543 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 LSM12Q3MHD2 195 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PTPN20Q4JDL3 420 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 VSIG10LQ86VR7 867 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 SMYD1Q8NB12 490 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PIH1D2Q8WWB5 315 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 MAGEB10Q96LZ2 347 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 OSGEPL1Q9H4B0 414 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 DNAAF2Q9NVR5 837 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 RNASEH1O60930 286 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 FTH1P02794 183 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 NR4A1P22736 598 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 HSPA14Q0VDF9 509 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 TNFAIP8L3Q5GJ75 292 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PPM1JQ5JR12 505 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 CERCAMQ5T4B2 595 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 TRIM40Q6P9F5 258 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ZYG11AQ6WRX3 759 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ZFAND2BQ8WV99 257 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 UBE2E3Q969T4 207 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 NXNL1Q96CM4 212 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 C1GALT1C1Q96EU7 318 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 SENP8Q96LD8 212 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 TEFMQ96QE5 360 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 SPATC1LQ9H0A9 340 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ASB8Q9H765 288 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ENTPD4Q9Y227 616 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 CARD8Q9Y2G2 431 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 TDRKHQ9Y2W6 561 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 UBIAD1Q9Y5Z9 338 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 MRPL42Q9Y6G3 142 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PMF1-BGLAPU3KQ54 211 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 MAP2P11137 1827 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ADGRB1O14514 1584 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 DNAJA2O60884 412 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 RECQL4O94761 1208 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ZBTB7AO95365 584 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ECDO95905 644 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 LIMK2P53671 638 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 RHAGQ02094 409 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 VPS26BQ4G0F5 336 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ANKRD22Q5VYY1 191 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 DRICH1Q6PGQ1 229 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 CYP4X1Q8N118 509 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 SKA1Q96BD8 255 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 ROPN1LQ96C74 230 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 GLT1D1Q96MS3 346 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 SEMA3CQ99985 751 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 GATA5Q9BWX5 397 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 AASDHPPTQ9NRN7 309 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 RAD18Q9NS91 495 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 FAM53CQ9NYF3 392 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 PLK2Q9NYY3 685 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 NFKBIL1Q9UBC1 381 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 VPS4AQ9UN37 437 aa10.67□□□□□ -0.7
CLTCL1-209ENST00000617103 AIREO43918 545 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 LRCH4O75427 683 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 POLR2JP52435 117 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CPSF6Q16630 551 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 AKIRIN2Q53H80 203 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 MON1BQ7L1V2 547 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PLD5Q8N7P1 536 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 MINDY2Q8NBR6 621 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNF570Q96NI8 536 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 WDR37Q9Y2I8 494 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 GSAPA4D1B5 854 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ANKDD1BA6NHY2 528 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 TULP3O75386 442 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 NTSP30990 170 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 WNT3AP56704 352 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 COPZ1P61923 177 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PEX6Q13608 980 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 GALNT3Q14435 633 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CA9Q16790 459 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 NADK2Q4G0N4 442 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 REP15Q6BDI9 236 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 GALNT5Q7Z7M9 940 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 SCAIQ8N9R8 606 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 TRPV1Q8NER1 839 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PDCD10Q9BUL8 212 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ALG2Q9H553 416 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 MARCH2Q9P0N8 246 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNHIT2Q9UHR6 403 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 POLR3HQ9Y535 204 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 DIP2AQ14689 1571 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 A0A1W2PRG6 482 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 IRGMA1A4Y4 181 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 NKRFO15226 690 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PSIP1O75475 530 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 POMCP01189 267 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 RAB27AP51159 221 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms