RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 RECQL5O94762 991 aaPredicted RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 RPLP0P05388 317 aaKnown RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 CCL7P80098 99 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 BCL2L1Q07817 233 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 NSUN2Q08J23 767 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDX1-202ENST00000616154 CLN3Q13286 438 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 TXNRD3NBQ6F5E7 133 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 INO80CQ6PI98 192 aaPredicted RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 DPPA4Q7L190 304 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 GPR156Q8NFN8 814 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 FUBP1Q96AE4 644 aaKnown RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 CSPG4P5Q96PW8 444 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 EPB41L5Q9HCM4 733 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 RCOR3Q9P2K3 495 aaPredicted RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 ASH1LQ9NR48 2969 aaKnown RBP19.01■□□□□ 0.63
CDX1-202ENST00000616154 A0A1W2PQM1 296 aa19■□□□□ 0.63
CDX1-202ENST00000616154 TMEM202A6NGA9 273 aa19■□□□□ 0.63
CDX1-202ENST00000616154 CACNB4O00305 520 aaPredicted RBP19■□□□□ 0.63
CDX1-202ENST00000616154 DAPK3O43293 454 aa19■□□□□ 0.63
CDX1-202ENST00000616154 HOXC4P09017 264 aaPredicted RBP19■□□□□ 0.63
CDX1-202ENST00000616154 ELFN1P0C7U0 828 aa19■□□□□ 0.63
CDX1-202ENST00000616154 CCKBRP32239 447 aa19■□□□□ 0.63
CDX1-202ENST00000616154 ARL4AP40617 200 aa19■□□□□ 0.63
CDX1-202ENST00000616154 POLR2LP62875 67 aaKnown RBP19■□□□□ 0.63
CDX1-202ENST00000616154 IL10RBQ08334 325 aa19■□□□□ 0.63
CDX1-202ENST00000616154 SMTNL2Q2TAL5 461 aa19■□□□□ 0.63
CDX1-202ENST00000616154 OGFOD3Q6PK18 319 aa19■□□□□ 0.63
CDX1-202ENST00000616154 LIPIQ6XZB0 460 aa19■□□□□ 0.63
CDX1-202ENST00000616154 ARHGAP36Q6ZRI8 547 aa19■□□□□ 0.63
CDX1-202ENST00000616154 TMEM139Q8IV31 216 aa19■□□□□ 0.63
CDX1-202ENST00000616154 OR56A4Q8NGH8 313 aa19■□□□□ 0.63
CDX1-202ENST00000616154 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
CDX1-202ENST00000616154 OR1E3Q8WZA6 343 aa19■□□□□ 0.63
CDX1-202ENST00000616154 BTBD6Q96KE9 485 aa19■□□□□ 0.63
CDX1-202ENST00000616154 ZNF599Q96NL3 588 aa19■□□□□ 0.63
CDX1-202ENST00000616154 STRADBQ9C0K7 418 aa19■□□□□ 0.63
CDX1-202ENST00000616154 LRRN3Q9H3W5 708 aa19■□□□□ 0.63
CDX1-202ENST00000616154 PCDH18Q9HCL0 1135 aa19■□□□□ 0.63
CDX1-202ENST00000616154 FGF22Q9HCT0 170 aa19■□□□□ 0.63
CDX1-202ENST00000616154 STAU2Q9NUL3 570 aaKnown RBP eCLIP19■□□□□ 0.63
CDX1-202ENST00000616154 PCDHGA7Q9Y5G6 932 aa19■□□□□ 0.63
CDX1-202ENST00000616154 PIEZO2Q9H5I5 2752 aa19■□□□□ 0.63
CDX1-202ENST00000616154 DFFAO00273 331 aa19■□□□□ 0.63
CDX1-202ENST00000616154 TRAFD1O14545 582 aaPredicted RBP19■□□□□ 0.63
CDX1-202ENST00000616154 TNFRSF10CO14798 259 aa19■□□□□ 0.63
CDX1-202ENST00000616154 H2AFZP0C0S5 128 aa19■□□□□ 0.63
CDX1-202ENST00000616154 GM2AP17900 193 aa19■□□□□ 0.63
CDX1-202ENST00000616154 KELP23276 732 aa19■□□□□ 0.63
CDX1-202ENST00000616154 ARSEP51690 589 aa19■□□□□ 0.63
CDX1-202ENST00000616154 INHBCP55103 352 aa19■□□□□ 0.63
CDX1-202ENST00000616154 AP1S1P61966 158 aa19■□□□□ 0.63
CDX1-202ENST00000616154 CERCAMQ5T4B2 595 aa19■□□□□ 0.63
CDX1-202ENST00000616154 H2AFVQ71UI9 128 aa19■□□□□ 0.63
CDX1-202ENST00000616154 RAB11FIP2Q7L804 512 aa19■□□□□ 0.63
CDX1-202ENST00000616154 FBXO39Q8N4B4 442 aa19■□□□□ 0.63
CDX1-202ENST00000616154 SPOCK2Q92563 424 aa19■□□□□ 0.63
CDX1-202ENST00000616154 TMEM74Q96NL1 305 aa19■□□□□ 0.63
CDX1-202ENST00000616154 PSKH2Q96QS6 385 aa19■□□□□ 0.63
CDX1-202ENST00000616154 APPL1Q9UKG1 709 aa19■□□□□ 0.63
CDX1-202ENST00000616154 TENM4Q6N022 2769 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 PROSCO94903 275 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 TMEM253P0C7T8 217 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 PNLIPP16233 465 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 GLB1P16278 677 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 IL4RP24394 825 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 MAN1A1P33908 653 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 UGT1A5P35504 534 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 TRIM23P36406 574 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 RENBPP51606 427 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 CCDC81Q6ZN84 652 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 TAF8Q7Z7C8 310 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 CCNJLQ8IV13 435 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 LRRC8AQ8IWT6 810 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 PAF1Q8N7H5 531 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 CTNNBL1Q8WYA6 563 aaPredicted RBP18.99■□□□□ 0.63
CDX1-202ENST00000616154 NSMCE3Q96MG7 304 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 PACSIN1Q9BY11 444 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 FOXP3Q9BZS1 431 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 MRPL40Q9NQ50 206 aaKnown RBP18.99■□□□□ 0.63
CDX1-202ENST00000616154 ETNK2Q9NVF9 386 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 ZNHIT6Q9NWK9 470 aaKnown RBP18.99■□□□□ 0.63
CDX1-202ENST00000616154 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.99■□□□□ 0.63
CDX1-202ENST00000616154 SEPT3Q9UH03 358 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 ACSL6Q9UKU0 697 aa18.99■□□□□ 0.63
CDX1-202ENST00000616154 NOBOXO60393 691 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 ZIC2O95409 532 aaPredicted RBP18.98■□□□□ 0.63
CDX1-202ENST00000616154 PEX11BO96011 259 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 SLC5A2P31639 672 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 SCNN1BP51168 640 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 TSR1Q2NL82 804 aaKnown RBP18.98■□□□□ 0.63
CDX1-202ENST00000616154 TMCO4Q5TGY1 634 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 TMCO3Q6UWJ1 677 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 TP53INP2Q8IXH6 220 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 FAM46DQ8NEK8 389 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 HSPH1Q92598 858 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 CCNL2Q96S94 520 aaPredicted RBP18.98■□□□□ 0.63
CDX1-202ENST00000616154 SEMA4CQ9C0C4 833 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 WDR26Q9H7D7 661 aa18.98■□□□□ 0.63
CDX1-202ENST00000616154 ATXN7L1Q9ULK2 861 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms