RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PCDHGA3Q9Y5H0 932 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 HGSO14964 777 aaPredicted RBP23.45■■□□□ 1.34
MMP28-203ENST00000612672 PPM1DO15297 605 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 DUX1O43812 170 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 SERPINA4P29622 427 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 CSNK1DP48730 415 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 LIMK2P53671 638 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 UBAP2LQ14157 1087 aaKnown RBP23.45■■□□□ 1.34
MMP28-203ENST00000612672 CA9Q16790 459 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 CLEC16AQ2KHT3 1053 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 MON1BQ7L1V2 547 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 ARHGAP12Q8IWW6 846 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 NAGSQ8N159 534 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 KIAA1524Q8TCG1 905 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 ART4Q93070 314 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 FRMD8Q9BZ67 464 aaPredicted RBP23.45■■□□□ 1.34
MMP28-203ENST00000612672 ATP13A3Q9H7F0 1226 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 CATSPERBQ9H7T0 1116 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 NLRC4Q9NPP4 1024 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 OCIAD1Q9NX40 245 aa23.45■■□□□ 1.34
MMP28-203ENST00000612672 SIGLEC16A6NMB1 481 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 RHPN2P1A8MT19 583 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 MYCLP1P12525 358 aaPredicted RBP23.44■■□□□ 1.34
MMP28-203ENST00000612672 KELP23276 732 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 SOX5P35711 763 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 STAT1P42224 750 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 ZNF143P52747 638 aaPredicted RBP23.44■■□□□ 1.34
MMP28-203ENST00000612672 POLR2FP61218 127 aaKnown RBP23.44■■□□□ 1.34
MMP28-203ENST00000612672 FOXK1P85037 733 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 ACOX1Q15067 660 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 PTPRRQ15256 657 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 CNGA3Q16281 694 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 PPP1R15BQ5SWA1 713 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 TMEM164Q5U3C3 297 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 SLC30A9Q6PML9 568 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 HEATR4Q86WZ0 1026 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 PHF13Q86YI8 300 aaPredicted RBP23.44■■□□□ 1.34
MMP28-203ENST00000612672 TP53INP2Q8IXH6 220 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 NPWQ8N729 165 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 MCEEQ96PE7 176 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 SUFUQ9UMX1 484 aa23.44■■□□□ 1.34
MMP28-203ENST00000612672 FGF10O15520 208 aaPredicted RBP23.43■■□□□ 1.34
MMP28-203ENST00000612672 THRAP10827 490 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 GNPDA1P46926 289 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 POLD2P49005 469 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 ATP1A2P50993 1020 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 TPI1P60174 286 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 TCP11X2Q5H9J9 407 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 NUS1Q96E22 293 aa23.43■■□□□ 1.34
MMP28-203ENST00000612672 IGHV1OR21-1A0A087WYE8 117 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 NKX2-8O15522 239 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 NSFP46459 744 aaKnown RBP23.42■■□□□ 1.34
MMP28-203ENST00000612672 NDST2P52849 883 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 BCL2L1Q07817 233 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 TRIM72Q6ZMU5 477 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 CACNA2D3Q8IZS8 1091 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 IL22RA1Q8N6P7 574 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 TEX101Q9BY14 249 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 VPS16Q9H269 839 aa23.42■■□□□ 1.34
MMP28-203ENST00000612672 FAM207AQ9NSI2 230 aaPredicted RBP23.42■■□□□ 1.34
MMP28-203ENST00000612672 AKAP7Q9P0M2 348 aaPredicted RBP23.42■■□□□ 1.34
MMP28-203ENST00000612672 RAD1O60671 282 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 PALMO75781 387 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 LHCGRP22888 699 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 CTBSQ01459 385 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 ZNF761Q86XN6 746 aaPredicted RBP23.41■■□□□ 1.34
MMP28-203ENST00000612672 BMPERQ8N8U9 685 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 OR4D9Q8NGE8 314 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 PEBP4Q96S96 227 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 DDA1Q9BW61 102 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 CINPQ9BW66 212 aaPredicted RBP23.41■■□□□ 1.34
MMP28-203ENST00000612672 GSDMCQ9BYG8 508 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 CDH19Q9H159 772 aa23.41■■□□□ 1.34
MMP28-203ENST00000612672 ZNF71Q9NQZ8 489 aaPredicted RBP23.41■■□□□ 1.34
MMP28-203ENST00000612672 SPTBN1Q01082 2364 aaKnown RBP23.41■■□□□ 1.34
MMP28-203ENST00000612672 UNC79Q9P2D8 2635 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 A0A0U1RQS6 177 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 CR2P20023 1033 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 TNFAIP3P21580 790 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 ETV3P41162 512 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 CASRP41180 1078 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 CDK3Q00526 305 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 ILF3Q12906 894 aaKnown RBP eCLIP23.4■■□□□ 1.34
MMP28-203ENST00000612672 TSR1Q2NL82 804 aaKnown RBP23.4■■□□□ 1.34
MMP28-203ENST00000612672 ANKS6Q68DC2 871 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 DNAJC24Q6P3W2 148 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 HSD11B1LQ7Z5J1 315 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 ARFGAP1Q8N6T3 406 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 KCTD15Q96SI1 283 aaPredicted RBP23.4■■□□□ 1.34
MMP28-203ENST00000612672 SPRY4Q9C004 299 aa23.4■■□□□ 1.34
MMP28-203ENST00000612672 TRNAU1APQ9NX07 287 aaKnown RBP23.4■■□□□ 1.34
MMP28-203ENST00000612672 CALB1P05937 261 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 ADCY8P40145 1251 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 GPR3P46089 330 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 SCNN1BP51168 640 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 TRA2AQ13595 282 aaKnown RBP eCLIP23.39■■□□□ 1.33
MMP28-203ENST00000612672 CLPPQ16740 277 aaPredicted RBP23.39■■□□□ 1.33
MMP28-203ENST00000612672 DENND2CQ68D51 928 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 RFLNAQ6ZTI6 216 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 UNC5BQ8IZJ1 945 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms