RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 ZFP36L1Q07352 338 aaKnown RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 LBRQ14739 615 aaKnown RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 AGERQ15109 404 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 CNGA3Q16281 694 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 LINC00303Q3SY05 128 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 RAET1GQ6H3X3 334 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 PNCKQ6P2M8 343 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 PIM3Q86V86 326 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZSCAN1Q8NBB4 408 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZDHHC1Q8WTX9 485 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 PATE1Q8WXA2 126 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 SPATS2LQ9NUQ6 558 aaKnown RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 PARVAQ9NVD7 372 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 PCDHGC4Q9Y5F7 938 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 C9orf172C9J069 976 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 NUDT21O43809 227 aaKnown RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 WISP1O95388 367 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 CPNE6O95741 557 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 CCL4P13236 92 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 CCNB1P14635 433 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 GM2AP17900 193 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 WT1P19544 449 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 MIPP30301 263 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 ETV3P41162 512 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 CSNK1DP48730 415 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 MAXP61244 160 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 IL10RBQ08334 325 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 PTPRRQ15256 657 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 STX1AQ16623 288 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 SMTNL2Q2TAL5 461 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 AFMIDQ63HM1 303 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 OGFOD3Q6PK18 319 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 SLITRK4Q8IW52 837 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 HSPH1Q92598 858 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 CCDC74BQ96LY2 380 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 ERGIC2Q96RQ1 377 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 TAAR2Q9P1P5 351 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZFC3H1O60293 1989 aaKnown RBP13.36□□□□□ -0.27
HMGB1P24-201ENST00000611897 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 H3BRJ5 948 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TNFRSF10CO14798 259 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ECEL1O95672 775 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 PNLIPP16233 465 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 CTPS1P17812 591 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 MPSTP25325 297 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 VIPR1P32241 457 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TRIM23P36406 574 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 POLD2P49005 469 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 RENBPP51606 427 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ASIC2Q16515 512 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TMEM164Q5U3C3 297 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 NKAIN2Q5VXU1 208 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 FNIP1Q8TF40 1166 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 COQ10AQ96MF6 247 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 PSKH2Q96QS6 385 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZWILCHQ9H900 591 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 ACSL6Q9UKU0 697 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 SUFUQ9UMX1 484 aa13.35□□□□□ -0.27
HMGB1P24-201ENST00000611897 A0A0U1RQS6 177 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 NPIPB15A6NHN6 443 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 LRRC53A6NM62 1247 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 CYSRT1A8MQ03 144 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 B4GAT1O43505 415 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 CEACAM5P06731 702 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 CYP2A6P11509 494 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 LHCGRP22888 699 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 AMPD1P23109 780 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ARL4AP40617 200 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ACTR1BP42025 376 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms