RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 C2orf81A6NN90 581 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 SLC22A2O15244 555 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 TMCC1O94876 653 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 JUNP05412 331 aaKnown RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 PDHA1P08559 390 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 PDCD2Q16342 344 aaPredicted RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 AFTPHQ6ULP2 937 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 FRMD7Q6ZUT3 714 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 CARNMT1Q8N4J0 409 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 LPCAT1Q8NF37 534 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 OR4K2Q8NGD2 314 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 PANX3Q96QZ0 392 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 SLC22A12Q96S37 553 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 ZNF385DQ9H6B1 395 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 GTSE1Q9NYZ3 720 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 STOML1Q9UBI4 398 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 MAFFQ9ULX9 164 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 MTF2Q9Y483 593 aaPredicted RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 PCDHGC4Q9Y5F7 938 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 H0Y626 953 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 SNAP91O60641 907 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 ZMPSTE24O75844 475 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 HNRNPLP14866 589 aaKnown RBP eCLIP28.05■■■□□ 2.08
CSPG5-205ENST00000610462 PTDSS1P48651 473 aaKnown RBP28.05■■■□□ 2.08
CSPG5-205ENST00000610462 RIPOR1Q6ZS17 1223 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 FAR2Q96K12 515 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 LENG8Q96PV6 779 aaPredicted RBP28.05■■■□□ 2.08
CSPG5-205ENST00000610462 RTKNQ9BST9 563 aa28.05■■■□□ 2.08
CSPG5-205ENST00000610462 TMEM233B4DJY2 109 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 PENKP01210 267 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 CD1DP15813 335 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ITGAXP20702 1163 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 SP100P23497 879 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 PIK3R1P27986 724 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ADSLP30566 484 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 GCKP35557 465 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 CUL3Q13618 768 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 RALGPS1Q5JS13 557 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 LINGO4Q6UY18 593 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 HJURPQ8NCD3 748 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ACTRT2Q8TDY3 377 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ADAMTS19Q8TE59 1207 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 DIS3LQ8TF46 1054 aaKnown RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 MAELQ96JY0 434 aaKnown RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 MRPL17Q9NRX2 175 aaKnown RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ARHGAP26Q9UNA1 814 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 KIAA1671Q9BY89 1806 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 CARNS1A5YM72 827 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 CLTBP09497 229 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 IMPDH1P20839 514 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 MZF1P28698 734 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ACTR3P61158 418 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 SULT2A1Q06520 285 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 GALNT1Q10472 559 aaPredicted RBP28.04■■■□□ 2.08
CSPG5-205ENST00000610462 CCDC6Q16204 474 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ITIH5Q86UX2 942 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 PHF21BQ96EK2 531 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 ADGRE3Q9BY15 652 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 IL21Q9HBE4 155 aa28.04■■■□□ 2.08
CSPG5-205ENST00000610462 GREM1O60565 184 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 PRSS56P0CW18 603 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 THRAP10827 490 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 PPARGP37231 505 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 KCNC1P48547 511 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 PLK1P53350 603 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 PABPC1LQ4VXU2 614 aaKnown RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 INO80DQ53TQ3 878 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 NXNQ6DKJ4 435 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 NCEH1Q6PIU2 408 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 ARL14EPQ8N8R7 260 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 PTERQ96BW5 349 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 TCF12Q99081 682 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 STX18Q9P2W9 335 aaKnown RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 LHX3Q9UBR4 397 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 ANKRD66B4E2M5 251 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 GFRA2O00451 464 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 LUC7L3O95232 432 aaKnown RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 OLFM2O95897 454 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 LPOP22079 712 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 BTKQ06187 659 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 TRAF2Q12933 501 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 C1orf146Q5VVC0 180 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 Q6ZNB5 142 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 AFAP1L2Q8N4X5 818 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 L3HYPDHQ96EM0 354 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 MYCBPQ99417 103 aaPredicted RBP28.03■■■□□ 2.08
CSPG5-205ENST00000610462 FEM1AQ9BSK4 669 aa28.03■■■□□ 2.08
CSPG5-205ENST00000610462 DENND4CQ5VZ89 1909 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 TYW5A2RUC4 315 aaKnown RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 RGSL1A5PLK6 1076 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 SDHDO14521 159 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 SCAMP3O14828 347 aaKnown RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 CCNT2O60583 730 aaKnown RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 ZNF37AP17032 561 aaPredicted RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 CDC25CP30307 473 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 NFKB2Q00653 900 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 SATB1Q01826 763 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 SLC34A1Q06495 639 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 PDAP1Q13442 181 aaKnown RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 PGM2L1Q6PCE3 622 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms