RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 MSX2P35548 267 aaPredicted RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TRAF2Q12933 501 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 PRKAA1Q13131 559 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TSNAXIP1Q2TAA8 658 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 SWT1Q5T5J6 900 aaKnown RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 C1orf146Q5VVC0 180 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 RIPOR1Q6ZS17 1223 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ISCA2Q86U28 154 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 PIANPQ8IYJ0 282 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 APCDD1Q8J025 514 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 KDM1BQ8NB78 822 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 UBXN10Q96LJ8 280 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TDRD1Q9BXT4 1180 aaKnown RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 FKBPLQ9UIM3 349 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 SSX2IPQ9Y2D8 614 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 A0A088AWK7 358 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ATP6AP2A0A1C7CYW4 349 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ILVBLA1L0T0 632 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TRIM43BA6NCK2 446 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 BNIP3LO60238 219 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ATP6AP2O75787 350 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 WFS1O76024 890 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 SUPT7LO94864 414 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ALPIP09923 528 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 GNAZP19086 355 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 CR2P20023 1033 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 CSKP41240 450 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 PPP1R3AQ16821 1122 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TCHHL1Q5QJ38 904 aaPredicted RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 PSAPL1Q6NUJ1 521 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 DEFB107AQ8IZN7 70 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 TRIM43Q96BQ3 446 aaPredicted RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 CCDC97Q96F63 343 aaPredicted RBP15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 SPG21Q9NZD8 308 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
AC009961.1-203ENST00000607836 SMAD6O43541 496 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TBX10O75333 385 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TM7SF2O76062 418 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 IPO13O94829 963 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 CKMP06732 381 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 COX4I1P13073 169 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 EPHB3P54753 998 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 WDR5P61964 334 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TNK2Q07912 1038 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 CDH18Q13634 790 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 KLHDC10Q6PID8 442 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 GAREM2Q75VX8 874 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TMA16Q96EY4 203 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 ZNF570Q96NI8 536 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 STN1Q9H668 368 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 MRPL17Q9NRX2 175 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 IKZF3Q9UKT9 509 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TBC1D30Q9Y2I9 924 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 NCF1BA6NI72 391 aaPredicted RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 ZBBXA8MT70 800 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 IQCF5A8MTL0 148 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 NCF1CA8MVU1 366 aaPredicted RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 UBXN8O00124 270 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 UBFD1O14562 309 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 F11P03951 625 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 CLTBP09497 229 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 CNPP09543 421 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 SULT2A1Q06520 285 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TPGS2Q68CL5 300 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 MRNIPQ6NTE8 343 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 KLC3Q6P597 504 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 SNX32Q86XE0 403 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 HPS6Q86YV9 775 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 PAF1Q8N7H5 531 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 DDI1Q8WTU0 396 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 NRG4Q8WWG1 115 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 STMN2Q93045 179 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 RPL10LQ96L21 214 aaKnown RBP15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 SLC30A3Q99726 388 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 FEM1AQ9BSK4 669 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 IL21Q9HBE4 155 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 PTGDR2Q9Y5Y4 395 aa15.3■□□□□ 0.04
AC009961.1-203ENST00000607836 A0A1W2PRU2 124 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 H2AFYO75367 372 aaKnown RBP15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 PSMG1O95456 288 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 ZNF140P52738 457 aaPredicted RBP15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 STC1P52823 247 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 ATXN3P54252 364 aaPredicted RBP15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 PFKPQ01813 784 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 ASPHQ12797 758 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 PDAP1Q13442 181 aaKnown RBP15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 RAB33AQ14088 237 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 NAA25Q14CX7 972 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 OR4D1Q15615 310 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 PAQR3Q6TCH7 311 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 SCG3Q8WXD2 468 aaKnown RBP15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 ESAMQ96AP7 390 aa15.29■□□□□ 0.04
AC009961.1-203ENST00000607836 TSPAN17Q96FV3 270 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms