RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CBX8Q9HC52 389 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PCDH18Q9HCL0 1135 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CYP4F12Q9HCS2 524 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 FGF22Q9HCT0 170 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.63□□□□□ -1.19
CUX1-219ENST00000606749 KCTD5Q9NXV2 234 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 IP6K2Q9UHH9 426 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 MOSPD1Q9UJG1 213 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 APPL1Q9UKG1 709 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CAPN11Q9UMQ6 739 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PPIL1Q9Y3C6 166 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 KIF26BQ2KJY2 2108 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 BAHCC1Q9P281 2608 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 A0A087X0T9 212 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 PRSS38A1L453 326 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 NPIPB15A6NHN6 443 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 D6RAR5 112 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 K7ENP7 123 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 MYO1FO00160 1098 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 PLD2O14939 933 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 NUDT21O43809 227 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 PGLSO95336 258 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 SERPING1P05155 500 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 FGF1P05230 155 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 RPLP0P05388 317 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 CEACAM5P06731 702 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ITGA2BP08514 1039 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CD48P09326 243 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 FAM228BP0C875 321 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CYP2A6P11509 494 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 MYCLP1P12525 358 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 NFKBIAP25963 317 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 SLC5A2P31639 672 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CCKBRP32239 447 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 UGT1A5P35504 534 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ETV3P41162 512 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 MMP13P45452 471 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ARSEP51690 589 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 INHBCP55103 352 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CDH6P55285 790 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ZBED6P86452 979 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 B4GALNT1Q00973 533 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 RHDQ02161 417 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ZFP36L1Q07352 338 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 TRAF2Q12933 501 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 EIF3IQ13347 325 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 ARHGEF7Q14155 803 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 HLTFQ14527 1009 aaKnown RBP eCLIP7.62□□□□□ -1.19
CUX1-219ENST00000606749 NFKBIBQ15653 356 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 ATP13A4Q4VNC1 1196 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 C14orf28Q4W4Y0 310 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 TDRD12Q587J7 1177 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 RALGPS1Q5JS13 557 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CERCAMQ5T4B2 595 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ARMC12Q5T9G4 340 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 DENND2CQ68D51 928 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 SPECC1LQ69YQ0 1117 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 INO80CQ6PI98 192 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 Q6ZVL8 140 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 RAB11FIP2Q7L804 512 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 TECPR1Q7Z6L1 1165 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 NRROSQ86YC3 692 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 CCNJLQ8IV13 435 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 BBS5Q8N3I7 341 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ZNF843Q8N446 348 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 FBXO39Q8N4B4 442 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ATPAF2Q8N5M1 289 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 TEX26Q8N6G2 289 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 FAM71BQ8TC56 605 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 GPBAR1Q8TDU6 330 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 NSMCE1Q8WV22 266 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 PIH1D2Q8WWB5 315 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 NUS1Q96E22 293 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 DTD2Q96FN9 168 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 SCRN2Q96FV2 425 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 WBP1Q96G27 269 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 TMEM74Q96NL1 305 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 FRMD8Q9BZ67 464 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 STRADBQ9C0K7 418 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 DPEP2Q9H4A9 486 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 EPB41L5Q9HCM4 733 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 PHPT1Q9NRX4 125 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 SPATS2LQ9NUQ6 558 aaKnown RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 LRIT1Q9P2V4 623 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ANAPC7Q9UJX3 599 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
CUX1-219ENST00000606749 RNF215Q9Y6U7 377 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 PTPRQQ9UMZ3 2332 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ANKRD36A6QL64 1941 aa7.62□□□□□ -1.19
CUX1-219ENST00000606749 ATMQ13315 3056 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 SMG1Q96Q15 3661 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 LRP4O75096 1905 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 A0A0U1RQS6 177 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 SYCE3A1L190 88 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 B4DGG1 531 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 PSMD11O00231 422 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 EFSO43281 561 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 B4GAT1O43505 415 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms