RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	GADD45B	O75293	160 aa	Predicted RBP	18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	HTR7	P34969	479 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	CCR10	P46092	362 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	NDST2	P52849	883 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	IGFBP7	Q16270	282 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	WDR59	Q6PJI9	974 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	SRL	Q86TD4	932 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	AGBL5	Q8NDL9	886 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	ZDHHC1	Q8WTX9	485 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	JPH3	Q8WXH2	748 aa	Predicted RBP	18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	C11orf70	Q9BRQ4	267 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	TUBGCP2	Q9BSJ2	902 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	GSDMC	Q9BYG8	508 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	ATP13A3	Q9H7F0	1226 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	CATSPERB	Q9H7T0	1116 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	MYO9A	B2RTY4	2548 aa		18.31	■□□□□ 0.52
IRF3-231	ENST00000602190	PPM1D	O15297	605 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	RAD1	O60671	282 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	ECEL1	O95672	775 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	ELFN1	P0C7U0	828 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	KRT3	P12035	628 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	GPD1	P21695	349 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	SERPINA4	P29622	427 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	JAM2	P57087	298 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	TRIM72	Q6ZMU5	477 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	CREBRF	Q8IUR6	639 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	CACNA2D3	Q8IZS8	1091 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	FAM26E	Q8N5C1	309 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	MLKL	Q8NB16	471 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	TSEN2	Q8NCE0	465 aa	Known RBP	18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	C3orf20	Q8ND61	904 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	PTCD2	Q8WV60	388 aa	Known RBP	18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	ART4	Q93070	314 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	ASPSCR1	Q9BZE9	553 aa		18.3	■□□□□ 0.52
IRF3-231	ENST00000602190	CCP110	O43303	1012 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	ALDH4A1	P30038	563 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	FASLG	P48023	281 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	ZNF143	P52747	638 aa	Predicted RBP	18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	RAB15	P59190	212 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	AMZ1	Q400G9	498 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	PPP1R15B	Q5SWA1	713 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	PHF13	Q86YI8	300 aa	Predicted RBP	18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	IL22RA1	Q8N6P7	574 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	SLC30A5	Q8TAD4	765 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	PATE1	Q8WXA2	126 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	MIB2	Q96AX9	1013 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	TEFM	Q96QE5	360 aa	Known RBP	18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	PCDHB18P	Q96TA0	734 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	OCIAD1	Q9NX40	245 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	KCTD5	Q9NXV2	234 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	SLC17A4	Q9Y2C5	497 aa		18.29	■□□□□ 0.52
IRF3-231	ENST00000602190	SIGLEC16	A6NMB1	481 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	RHPN2P1	A8MT19	583 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	ZW10	O43264	779 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	HTRA2	O43464	458 aa	Predicted RBP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	IVL	P07476	585 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	AK4	P27144	223 aa	Predicted RBP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	ILF3	Q12906	894 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	TMEM71	Q6P5X7	295 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	ARHGAP22	Q7Z5H3	698 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	ZNF354C	Q86Y25	554 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	FAM114A1	Q8IWE2	563 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	ARHGAP12	Q8IWW6	846 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	CCDC112	Q8NEF3	446 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	C9orf43	Q8TAL5	461 aa	Predicted RBP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	RTP4	Q96DX8	246 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	CARS2	Q9HA77	564 aa	Known RBP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	TMEM9	Q9P0T7	183 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	B4GALT6	Q9UBX8	382 aa		18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	TMEM184B	Q9Y519	407 aa	Predicted RBP	18.28	■□□□□ 0.52
IRF3-231	ENST00000602190	NKX2-8	O15522	239 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	DUX1	O43812	170 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	POLR2L	P62875	67 aa	Known RBP	18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	GPLD1	P80108	840 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	CDK3	Q00526	305 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	CDC20	Q12834	499 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	RFTN1	Q14699	578 aa	Predicted RBP	18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	CNGA3	Q16281	694 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	CFAP58	Q5T655	872 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	MON1B	Q7L1V2	547 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	PHLDB2	Q86SQ0	1253 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	HEATR4	Q86WZ0	1026 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	SLC39A8	Q9C0K1	460 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	PHPT1	Q9NRX4	125 aa	Predicted RBP	18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	DONSON	Q9NYP3	566 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	SUFU	Q9UMX1	484 aa		18.27	■□□□□ 0.52
IRF3-231	ENST00000602190	LOC101059948	A0A1B0GTJ6	334 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	CREB3	O43889	395 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	HEXIM1	O94992	359 aa	Known RBP	18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	SOD1	P00441	154 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	OAS2	P29728	719 aa	Known RBP	18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	CSTF2	P33240	577 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	PAPOLA	P51003	745 aa	Known RBP	18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	AP1S1	P61966	158 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	CTBS	Q01459	385 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	MC2R	Q01718	297 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	BCL2L1	Q07817	233 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	NKAIN2	Q5VXU1	208 aa		18.26	■□□□□ 0.51
IRF3-231	ENST00000602190	ANKS6	Q68DC2	871 aa		18.26	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms