RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 HERVK_113P63132 956 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 FKBP1BP68106 108 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 DSC3Q14574 896 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 MYLK3Q32MK0 819 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 RETREG3Q86VR2 466 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 MON1AQ86VX9 555 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 FAM110BQ8TC76 370 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 LRCH3Q96II8 777 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 ERVK-6Q9BXR3 956 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 AKTIPQ9H8T0 292 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 GMIPQ9P107 970 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 DNAJC15Q9Y5T4 150 aa20.25■□□□□ 0.83
SHKBP1-225ENST00000600733 TCRBV3S1A0A5B6 114 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 IGHA2P01877 340 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 PIRTP0C851 137 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 PSMC3P17980 439 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 TIAL1Q01085 375 aaKnown RBP eCLIP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 TRAP1Q12931 704 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 IKBKEQ14164 716 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 FAM45BPQ6NSW5 357 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 C8orf82Q6P1X6 216 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 KLHDC10Q6PID8 442 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 FAM45AQ8TCE6 357 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 MPP4Q96JB8 637 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 ZFRQ96KR1 1074 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 SLC29A1Q99808 456 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 CIB1Q99828 191 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 IL1RL2Q9HB29 575 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 FNIP2Q9P278 1114 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 SCML2Q9UQR0 700 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 C9JVG2 144 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 SLC2A3P11169 496 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 CD1DP15813 335 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 TYMPP19971 482 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 FOXA1P55317 472 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 APOFQ13790 326 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 SEMA3AQ14563 771 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 LPIN1Q14693 890 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 KIF19Q2TAC6 998 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 SAMD4BQ5PRF9 694 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 RAP1GAP2Q684P5 730 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 HMBOX1Q6NT76 420 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 MIB1Q86YT6 1006 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 CHERPQ8IWX8 916 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 PTGR2Q8N8N7 351 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 ZFP28Q8NHY6 868 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 BLOC1S5Q8TDH9 187 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 DNAJC1Q96KC8 554 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 ZNF597Q96LX8 424 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 RBM38Q9H0Z9 239 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 NOL11Q9H8H0 719 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 PLK2Q9NYY3 685 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 RNF11Q9Y3C5 154 aa20.24■□□□□ 0.83
SHKBP1-225ENST00000600733 UBXN8O00124 270 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 GOT2P00505 430 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 GPX3P22352 226 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 SLC7A1P30825 629 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 STX1BP61266 288 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 CYTH1Q15438 398 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 OR4D1Q15615 310 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 GEN1Q17RS7 908 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 FBXL22Q6P050 247 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 NUP93Q8N1F7 819 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 TEX26Q8N6G2 289 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 NSUN5Q96P11 429 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 CNOT6Q9ULM6 557 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 LOC285095A0A1B0GVY8 99 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 ZNF839A8K0R7 811 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 KPNA6O60684 536 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 CDK14O94921 469 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 HMBSP08397 361 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 NELFEP18615 380 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 FDXRP22570 491 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 SLC26A3P40879 764 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 NFKB2Q00653 900 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 ZNF280BQ86YH2 543 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 MYO1HQ8N1T3 1032 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 TTC9BQ8N6N2 239 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 UROC1Q96N76 676 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 KCNA7Q96RP8 456 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 SEMA3CQ99985 751 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 MID1IP1Q9NPA3 183 aa20.23■□□□□ 0.83
SHKBP1-225ENST00000600733 A0A0J9YYE9 177 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 H3BMM5 538 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 NR5A2O00482 541 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 MUSKO15146 869 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 TIPRLO75663 272 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 ACADVLP49748 655 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 GALNT3Q14435 633 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 PFKFB4Q16877 469 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 MSANTD2Q6P1R3 559 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 DHFR2Q86XF0 187 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 CLYBLQ8N0X4 340 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 OR13C4Q8NGS5 318 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 TADA1Q96BN2 335 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 PPWD1Q96BP3 646 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 OCEL1Q9H607 264 aa20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHKBP1-225ENST00000600733 PCDHB8Q9UN66 801 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms