RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CROTQ9UKG9 612 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 CNTN6Q9UQ52 1028 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 MFHAS1Q9Y4C4 1052 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 ANKRD36A6QL64 1941 aa17.64■□□□□ 0.42
SSBP4-207ENST00000600244 CDC14CA4D256 554 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 INPP4BO15327 924 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 FGFR1OPO95684 399 aaKnown RBP17.64■□□□□ 0.41
SSBP4-207ENST00000600244 LIG3P49916 1009 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 IQCB1Q15051 598 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
SSBP4-207ENST00000600244 JMJD6Q6NYC1 403 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-207ENST00000600244 MCEMP1Q8IX19 187 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 SLC35C1Q96A29 364 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 HMCESQ96FZ2 354 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 NPY6RQ99463 290 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 NAT10Q9H0A0 1025 aaKnown RBP17.64■□□□□ 0.41
SSBP4-207ENST00000600244 HSD3B7Q9H2F3 369 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 RCOR3Q9P2K3 495 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-207ENST00000600244 ST14Q9Y5Y6 855 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 CCDC168Q8NDH2 2452 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 POLEQ07864 2286 aa17.64■□□□□ 0.41
SSBP4-207ENST00000600244 PRSS38A1L453 326 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 A8MU76 341 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 POLR1CO15160 346 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-207ENST00000600244 CREG1O75629 220 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 GNA14O95837 355 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 FUCA1P04066 466 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 TFE3P19532 575 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-207ENST00000600244 ZNF165P49910 485 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 BIRC2Q13490 618 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 ZRANB3Q5FWF4 1079 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 ACBD5Q5T8D3 534 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-207ENST00000600244 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 WDTC1Q8N5D0 677 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 LMO3Q8TAP4 145 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 SLC25A23Q9BV35 468 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 GSDMCQ9BYG8 508 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 PCDH12Q9NPG4 1184 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 KCND3Q9UK17 655 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 PCDHGA6Q9Y5G7 932 aa17.63■□□□□ 0.41
SSBP4-207ENST00000600244 FBN3Q75N90 2809 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 SRGAP2O75044 1071 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 ZNF28P17035 718 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 AK4P27144 223 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 GEMIN4P57678 1058 aaKnown RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 MYL5Q02045 173 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 NR6A1Q15406 480 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 UGP2Q16851 508 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 SP5Q6BEB4 398 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 RRAGAQ7L523 313 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 TRIM59Q8IWR1 403 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 HCAR2Q8TDS4 363 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 ZNF606Q8WXB4 792 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 C19orf60Q96EN9 201 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 CPXM1Q96SM3 734 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 TTYH3Q9C0H2 523 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 TWSG1Q9GZX9 223 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 SAMSN1Q9NSI8 373 aaKnown RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 TRNAU1APQ9NX07 287 aaKnown RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 LUZP4Q9P127 313 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 ARMCX3Q9UH62 379 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-207ENST00000600244 MOSPD1Q9UJG1 213 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 DNHD1Q96M86 4753 aa17.62■□□□□ 0.41
SSBP4-207ENST00000600244 CROCCQ5TZA2 2017 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 TSPAN11A1L157 253 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 PIPSLA2A3N6 862 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 PMM2O15305 246 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 KATNA1O75449 491 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 DAB1O75553 588 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 NOP2P46087 812 aaKnown RBP17.61■□□□□ 0.41
SSBP4-207ENST00000600244 RAD51Q06609 339 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 ILF3Q12906 894 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSBP4-207ENST00000600244 SNAP47Q5SQN1 464 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 OLFML1Q6UWY5 402 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 C6orf15Q6UXA7 325 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-207ENST00000600244 LEKR1Q6ZMV7 388 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 NT5C3BQ969T7 300 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 PGAP3Q96FM1 320 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-207ENST00000600244 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 GDAP1L1Q96MZ0 367 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 CARS2Q9HA77 564 aaKnown RBP17.61■□□□□ 0.41
SSBP4-207ENST00000600244 SLAMF7Q9NQ25 335 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 PHTF1Q9UMS5 762 aa17.61■□□□□ 0.41
SSBP4-207ENST00000600244 DIDO1Q9BTC0 2240 aaKnown RBP17.6■□□□□ 0.41
SSBP4-207ENST00000600244 CFAP69A5D8W1 941 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 MED7O43513 233 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 KRT86O43790 486 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 XPAP23025 273 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-207ENST00000600244 ETFBP38117 255 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 MMP12P39900 470 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 FMO5P49326 533 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 GCNT1Q02742 428 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 ZXDCQ2QGD7 858 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-207ENST00000600244 FAM183BPQ6ZVS7 135 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms