RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 TECPR1Q7Z6L1 1165 aa15.08■□□□□ 0
LIG1-215ENST00000597901 TSPAN33Q86UF1 283 aa15.08■□□□□ 0
LIG1-215ENST00000597901 CCDC13Q8IYE1 715 aa15.08■□□□□ 0
LIG1-215ENST00000597901 NUS1Q96E22 293 aa15.08■□□□□ 0
LIG1-215ENST00000597901 SMIM14Q96QK8 99 aa15.08■□□□□ 0
LIG1-215ENST00000597901 MAK16Q9BXY0 300 aaKnown RBP15.08■□□□□ 0
LIG1-215ENST00000597901 TRIM5Q9C035 493 aa15.08■□□□□ 0
LIG1-215ENST00000597901 WDR26Q9H7D7 661 aa15.08■□□□□ 0
LIG1-215ENST00000597901 FGF22Q9HCT0 170 aa15.08■□□□□ 0
LIG1-215ENST00000597901 INTUQ9ULD6 942 aa15.08■□□□□ 0
LIG1-215ENST00000597901 GPR34Q9UPC5 381 aa15.08■□□□□ 0
LIG1-215ENST00000597901 A0A087WV48 116 aa15.07■□□□□ 0
LIG1-215ENST00000597901 LRRD1A4D1F6 860 aa15.07■□□□□ 0
LIG1-215ENST00000597901 C3orf70A6NLC5 250 aaPredicted RBP15.07■□□□□ 0
LIG1-215ENST00000597901 ZNF487B1APH4 448 aa15.07■□□□□ 0
LIG1-215ENST00000597901 USP12O75317 370 aa15.07■□□□□ 0
LIG1-215ENST00000597901 PRLP01236 227 aa15.07■□□□□ 0
LIG1-215ENST00000597901 KRT10P13645 584 aa15.07■□□□□ 0
LIG1-215ENST00000597901 SLC1A1P43005 524 aa15.07■□□□□ 0
LIG1-215ENST00000597901 PTSQ03393 145 aa15.07■□□□□ 0
LIG1-215ENST00000597901 ISXQ2M1V0 245 aa15.07■□□□□ 0
LIG1-215ENST00000597901 COL28A1Q2UY09 1125 aa15.07■□□□□ 0
LIG1-215ENST00000597901 LRRC38Q5VT99 294 aa15.07■□□□□ 0
LIG1-215ENST00000597901 OGFOD3Q6PK18 319 aa15.07■□□□□ 0
LIG1-215ENST00000597901 RFLNAQ6ZTI6 216 aa15.07■□□□□ 0
LIG1-215ENST00000597901 USP45Q70EL2 814 aa15.07■□□□□ 0
LIG1-215ENST00000597901 PLD5Q8N7P1 536 aa15.07■□□□□ 0
LIG1-215ENST00000597901 NAT6Q93015 286 aa15.07■□□□□ 0
LIG1-215ENST00000597901 HDAC11Q96DB2 347 aa15.07■□□□□ 0
LIG1-215ENST00000597901 DTD2Q96FN9 168 aa15.07■□□□□ 0
LIG1-215ENST00000597901 PDXPQ96GD0 296 aa15.07■□□□□ 0
LIG1-215ENST00000597901 LGMNQ99538 433 aa15.07■□□□□ 0
LIG1-215ENST00000597901 TEX101Q9BY14 249 aa15.07■□□□□ 0
LIG1-215ENST00000597901 CYP4F12Q9HCS2 524 aa15.07■□□□□ 0
LIG1-215ENST00000597901 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
LIG1-215ENST00000597901 SIRPGQ9P1W8 387 aa15.07■□□□□ 0
LIG1-215ENST00000597901 MOSPD1Q9UJG1 213 aa15.07■□□□□ 0
LIG1-215ENST00000597901 CHKBQ9Y259 395 aa15.07■□□□□ 0
LIG1-215ENST00000597901 HEY1Q9Y5J3 304 aa15.07■□□□□ 0
LIG1-215ENST00000597901 TDRD6O60522 2096 aaKnown RBP15.07■□□□□ 0
LIG1-215ENST00000597901 A0A0J9YYE9 177 aa15.06■□□□□ 0
LIG1-215ENST00000597901 CASC3O15234 703 aaKnown RBP15.06■□□□□ 0
LIG1-215ENST00000597901 TLX3O43711 291 aaPredicted RBP15.06■□□□□ 0
LIG1-215ENST00000597901 BRINP1O60477 761 aa15.06■□□□□ 0
LIG1-215ENST00000597901 TRBC1P01850 177 aa15.06■□□□□ 0
LIG1-215ENST00000597901 FUCA1P04066 466 aa15.06■□□□□ 0
LIG1-215ENST00000597901 HLA-DQB2P05538 268 aa15.06■□□□□ 0
LIG1-215ENST00000597901 CEACAM5P06731 702 aa15.06■□□□□ 0
LIG1-215ENST00000597901 MAGEA1P43355 309 aa15.06■□□□□ 0
LIG1-215ENST00000597901 EPHB1P54762 984 aa15.06■□□□□ 0
LIG1-215ENST00000597901 DPTQ07507 201 aa15.06■□□□□ 0
LIG1-215ENST00000597901 SLC9A4Q6AI14 798 aa15.06■□□□□ 0
LIG1-215ENST00000597901 TAF8Q7Z7C8 310 aa15.06■□□□□ 0
LIG1-215ENST00000597901 NLRP8Q86W28 1048 aa15.06■□□□□ 0
LIG1-215ENST00000597901 VSIG1Q86XK7 387 aa15.06■□□□□ 0
LIG1-215ENST00000597901 CNTD1Q8N815 330 aa15.06■□□□□ 0
LIG1-215ENST00000597901 ARL10Q8N8L6 244 aa15.06■□□□□ 0
LIG1-215ENST00000597901 TC2NQ8N9U0 490 aa15.06■□□□□ 0
LIG1-215ENST00000597901 FAM46DQ8NEK8 389 aa15.06■□□□□ 0
LIG1-215ENST00000597901 FGF11Q92914 225 aa15.06■□□□□ 0
LIG1-215ENST00000597901 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
LIG1-215ENST00000597901 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
LIG1-215ENST00000597901 CCDC3Q9BQI4 270 aa15.06■□□□□ 0
LIG1-215ENST00000597901 TMEM168Q9H0V1 697 aa15.06■□□□□ 0
LIG1-215ENST00000597901 ABCG8Q9H221 673 aa15.06■□□□□ 0
LIG1-215ENST00000597901 PHPT1Q9NRX4 125 aaPredicted RBP15.06■□□□□ 0
LIG1-215ENST00000597901 HYOU1Q9Y4L1 999 aa15.06■□□□□ 0
LIG1-215ENST00000597901 TTLL3Q9Y4R7 772 aa15.06■□□□□ 0
LIG1-215ENST00000597901 KCNK1O00180 336 aa15.05■□□□□ -0
LIG1-215ENST00000597901 APOL1O14791 398 aa15.05■□□□□ -0
LIG1-215ENST00000597901 MYCLP1P12525 358 aaPredicted RBP15.05■□□□□ -0
LIG1-215ENST00000597901 TNNT1P13805 278 aa15.05■□□□□ -0
LIG1-215ENST00000597901 COMTP21964 271 aa15.05■□□□□ -0
LIG1-215ENST00000597901 TEAD1P28347 426 aa15.05■□□□□ -0
LIG1-215ENST00000597901 ACTN2P35609 894 aa15.05■□□□□ -0
LIG1-215ENST00000597901 EIF2S3P41091 472 aaKnown RBP15.05■□□□□ -0
LIG1-215ENST00000597901 LSSP48449 732 aa15.05■□□□□ -0
LIG1-215ENST00000597901 PPIDQ08752 370 aaKnown RBP15.05■□□□□ -0
LIG1-215ENST00000597901 FAM182AQ5T1J6 154 aa15.05■□□□□ -0
LIG1-215ENST00000597901 LRRC66Q68CR7 880 aa15.05■□□□□ -0
LIG1-215ENST00000597901 LRRC69Q6ZNQ3 347 aa15.05■□□□□ -0
LIG1-215ENST00000597901 PDZD3Q86UT5 571 aa15.05■□□□□ -0
LIG1-215ENST00000597901 HEATR4Q86WZ0 1026 aa15.05■□□□□ -0
LIG1-215ENST00000597901 RHOT1Q8IXI2 618 aa15.05■□□□□ -0
LIG1-215ENST00000597901 KYQ8NBH2 561 aa15.05■□□□□ -0
LIG1-215ENST00000597901 GPR156Q8NFN8 814 aa15.05■□□□□ -0
LIG1-215ENST00000597901 CCL4L1Q8NHW4 92 aa15.05■□□□□ -0
LIG1-215ENST00000597901 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.05■□□□□ -0
LIG1-215ENST00000597901 GRAMD1AQ96CP6 724 aa15.05■□□□□ -0
LIG1-215ENST00000597901 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ -0
LIG1-215ENST00000597901 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ -0
LIG1-215ENST00000597901 PCDH9Q9HC56 1237 aa15.05■□□□□ -0
LIG1-215ENST00000597901 DDX56Q9NY93 547 aaKnown RBP15.05■□□□□ -0
LIG1-215ENST00000597901 ALG6Q9Y672 507 aa15.05■□□□□ -0
LIG1-215ENST00000597901 DMXL2Q8TDJ6 3036 aa15.05■□□□□ -0
LIG1-215ENST00000597901 PRSS38A1L453 326 aa15.04■□□□□ -0
LIG1-215ENST00000597901 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
LIG1-215ENST00000597901 GOLGA6BA6NDN3 693 aa15.04■□□□□ -0
LIG1-215ENST00000597901 TCEA3O75764 348 aa15.04■□□□□ -0
LIG1-215ENST00000597901 MPOP05164 745 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms