RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FMO1Q01740 532 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 TLE1Q04724 770 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 ZSCAN1Q8NBB4 408 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 PMEPA1Q969W9 287 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 NTAN1Q96AB6 310 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 C11orf70Q9BRQ4 267 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 SLC12A9Q9BXP2 914 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 SPATS2LQ9NUQ6 558 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 PCDHB11Q9Y5F2 797 aa16.52■□□□□ 0.24
SHKBP1-215ENST00000597649 J3KR12 359 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 NUDT21O43809 227 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 RECQL5O94762 991 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 HNRNPH3P31942 346 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 TRIM23P36406 574 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 YBEYP58557 167 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 KIAA1024LP59773 190 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 RALGDSQ12967 914 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 ARHGEF7Q14155 803 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 ERAP2Q6P179 960 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 DNAAF5Q86Y56 855 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 PTRH1Q86Y79 214 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 RCBTB1Q8NDN9 531 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 ATL2Q8NHH9 583 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 NSMCE3Q96MG7 304 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 ZNF641Q96N77 438 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 PCDHB18PQ96TA0 734 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 NCAPGQ9BPX3 1015 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 NUDT22Q9BRQ3 303 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 PDFQ9HBH1 243 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 SDK2Q58EX2 2172 aa16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 SPTAN1Q13813 2472 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-215ENST00000597649 WASH4PA8MWX3 477 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 TNFRSF10CO14798 259 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 PPFIA2O75334 1257 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 FUCA1P04066 466 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 HOXC4P09017 264 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 FGF3P11487 239 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 CD82P27701 267 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 MAZP56270 477 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 AMZ1Q400G9 498 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 PARP15Q460N3 678 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 EFHC2Q5JST6 749 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 BRAT1Q6PJG6 821 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 LIPIQ6XZB0 460 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 SLFN11Q7Z7L1 901 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 PIM3Q86V86 326 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 C17orf82Q86X59 251 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 LURAP1LQ8IV03 231 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 UMODL1-AS1Q8N2C9 162 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 NKD1Q969G9 470 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 B3GNT4Q9C0J1 378 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 CYP4F12Q9HCS2 524 aa16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 UBA2Q9UBT2 640 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-215ENST00000597649 CFAP69A5D8W1 941 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 CACNB4O00305 520 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 CPNE6O95741 557 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 FGF1P05230 155 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 KRT3P12035 628 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 NSFP46459 744 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 GSDMDP57764 484 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 CLEC16AQ2KHT3 1053 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 HGSNATQ68CP4 663 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 PPP1R2P3Q6NXS1 205 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 PANX2Q96RD6 677 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 LRRC19Q9H756 370 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 ANKMY1Q9P2S6 941 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 ST14Q9Y5Y6 855 aa16.49■□□□□ 0.23
SHKBP1-215ENST00000597649 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 A8MX80 341 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 STMND1H3BQB6 276 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 CREB3O43889 395 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 AKR1B10O60218 316 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 UNGP13051 313 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 CD1CP29017 333 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 ALDH4A1P30038 563 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 GRM3Q14832 879 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 IGFBP7Q16270 282 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 AFMIDQ63HM1 303 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 SCYL2Q6P3W7 929 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 ZNF438Q7Z4V0 828 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 SRLQ86TD4 932 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 TSEN2Q8NCE0 465 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 GPBAR1Q8TDU6 330 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 ECHDC3Q96DC8 303 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 TUBGCP5Q96RT8 1024 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 FZD10Q9ULW2 581 aa16.48■□□□□ 0.23
SHKBP1-215ENST00000597649 PRSS38A1L453 326 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 TMCO5BA8MYB1 307 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 CCP110O43303 1012 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms