RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SEPT3Q9UH03 358 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 A0A1W2PQC6 194 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 C9orf172C9J069 976 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 TRAFD1O14545 582 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 B4GAT1O43505 415 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 PRPSAP2O60256 369 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 CPNE6O95741 557 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 ITGB2P05107 769 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 CYP2A6P11509 494 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 MYCLP1P12525 358 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 CCNB1P14635 433 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 GM2AP17900 193 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 NFKBIAP25963 317 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 CD82P27701 267 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 MIPP30301 263 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 GNPDA1P46926 289 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 AP1S1P61966 158 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 ILF3Q12906 894 aaKnown RBP eCLIP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 MAMLD1Q13495 774 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF235Q14590 738 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 C16orf72Q14CZ0 275 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 SLITRK4Q8IW52 837 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 GPBAR1Q8TDU6 330 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 PEBP4Q96S96 227 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 TRIM4Q9C037 500 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 KCTD5Q9NXV2 234 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 PCDHGC4Q9Y5F7 938 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 MYO18BQ8IUG5 2567 aa10.57□□□□□ -0.72
CHMP2A-202ENST00000596708 KALRNO60229 2985 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 A0A1W2PQ67 120 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 ECEL1O95672 775 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 CPP00450 1065 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 FGF1P05230 155 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 SFTPCP11686 197 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 CCL4P13236 92 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 AK4P27144 223 aaPredicted RBP10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 VIPR1P32241 457 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 PPM1FP49593 454 aaPredicted RBP10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 CYP4F2P78329 520 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 NFKB2Q00653 900 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 MYL5Q02045 173 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 SLC10A7Q0GE19 358 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 CNGA3Q16281 694 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 RAET1GQ6H3X3 334 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 PLEKHA7Q6IQ23 1121 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 SLC30A9Q6PML9 568 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 IRF2BP2Q7Z5L9 587 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 HEATR4Q86WZ0 1026 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 TP53INP2Q8IXH6 220 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 LZTR1Q8N653 840 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 ARFGAP1Q8N6T3 406 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 NPWQ8N729 165 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 RCBTB1Q8NDN9 531 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 COQ10AQ96MF6 247 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 NSMCE3Q96MG7 304 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 PSKH2Q96QS6 385 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 NUDT22Q9BRQ3 303 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 ZWILCHQ9H900 591 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 TRNAU1APQ9NX07 287 aaKnown RBP10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 CWC15Q9P013 229 aaKnown RBP10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 TAAR2Q9P1P5 351 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 IL17BQ9UHF5 180 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 PHTF1Q9UMS5 762 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 PCDHGA4Q9Y5G9 962 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
CHMP2A-202ENST00000596708 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 TMEM191CA6NGB0 347 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 LRRC10BA6NIK2 292 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ARHGAP6O43182 974 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 HTRA2O43464 458 aaPredicted RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 HEXIM1O94992 359 aaKnown RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 FUCA1P04066 466 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CEACAM5P06731 702 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 FAM87AP0C7U9 286 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 AMPD1P23109 780 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ARL4AP40617 200 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ETV3P41162 512 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 GPR1P46091 355 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 HCAR3P49019 387 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CSRP3P50461 194 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ATP1A2P50993 1020 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF135P52742 658 aaPredicted RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CDK3Q00526 305 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CTBSQ01459 385 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 PEX6Q13608 980 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 TBR1Q16650 682 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 DOK6Q6PKX4 331 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF574Q6ZN55 896 aaPredicted RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ATG14Q6ZNE5 492 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 DTX1Q86Y01 620 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 NRROSQ86YC3 692 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 NSMCE1Q8WV22 266 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms