RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RHBDL2Q9NX52 303 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 ZFC3H1O60293 1989 aaKnown RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 hCG_2014768A0A024R1R8 64 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 TYW5A2RUC4 315 aaKnown RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 WASH4PA8MWX3 477 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 AURKAO14965 403 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 IRAK2O43187 625 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 SNAP91O60641 907 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 PMPCBO75439 489 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 SUPT7LO94864 414 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 F2P00734 622 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 YWHAQP27348 245 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 SERPINH1P50454 418 aaKnown RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 CDH15P55291 814 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 WNT3AP56704 352 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 ADAM17P78536 824 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 GRIK2Q13002 908 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 ZNF280DQ6N043 979 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 ISCA2Q86U28 154 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 CILP2Q8IUL8 1156 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 ADGRG5Q8IZF4 528 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 ZNF786Q8N393 782 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 BORCS5Q969J3 196 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 TRIM54Q9BYV2 358 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 AKTIPQ9H8T0 292 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
VRK3-209ENST00000594948 TMEM30AQ9NV96 361 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
VRK3-209ENST00000594948 SAC3D1A6NKF1 404 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ADM5C9JUS6 153 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 FXYD1O00168 92 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ANGPT2O15123 496 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CBFA2T3O75081 653 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ARSAP15289 507 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 PCSK1P29120 753 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CHRNA4P43681 627 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 NAA20P61599 178 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PRAMEP78395 509 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 GRSF1Q12849 480 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK3-209ENST00000594948 KIF19Q2TAC6 998 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ZNF789Q5FWF6 425 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 KANK2Q63ZY3 851 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ABRAXAS1Q6UWZ7 409 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 RAB44Q7Z6P3 723 aaPredicted RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 PATL1Q86TB9 770 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 PTRH1Q86Y79 214 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PHYKPLQ8IUZ5 450 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 LEMD2Q8NC56 503 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ANKRD49Q8WVL7 239 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 TMEM40Q8WWA1 233 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 VPS50Q96JG6 964 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 SDR39U1Q9NRG7 319 aaPredicted RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 NR5A2O00482 541 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 AZIN1O14977 448 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ACOX3O15254 700 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 GFAPP14136 432 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 LBPP18428 481 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CAPGP40121 348 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ENTPD1P49961 510 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 SUOXP51687 545 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 SPIDRQ14159 915 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ARTNQ5T4W7 220 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CLEC6AQ6EIG7 209 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 SPATA19Q7Z5L4 167 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 RTL3Q8N8U3 475 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PEX13Q92968 403 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 HSPBAP1Q96EW2 488 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 IMP4Q96G21 291 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 C3orf30Q96M34 536 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PLEKHG4BQ96PX9 1271 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ABHD16BQ9H3Z7 469 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 FBRSL1Q9HCM7 1045 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
VRK3-209ENST00000594948 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 CMTM6Q9NX76 183 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 ZNF639Q9UID6 485 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 PCDHA9Q9Y5H5 950 aa13.25□□□□□ -0.29
VRK3-209ENST00000594948 MROH6A6NGR9 719 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 ARPC2O15144 300 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 S1PR4O95977 384 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 IDO1P14902 403 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 CD1DP15813 335 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 CAPN3P20807 821 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 FDXRP22570 491 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 SLC6A2P23975 617 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 RFC2P35250 354 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms