RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RALGDSQ12967 914 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 SRSF6Q13247 344 aaKnown RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 ACOX1Q15067 660 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 TSR1Q2NL82 804 aaKnown RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 SPECC1LQ69YQ0 1117 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 LIPIQ6XZB0 460 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 VASH2Q86V25 355 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 ZSCAN1Q8NBB4 408 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 KIAA1524Q8TCG1 905 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 ISCUQ9H1K1 167 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 AKAP7Q9P0M2 348 aaPredicted RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 IFNKQ9P0W0 207 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 CAPN11Q9UMQ6 739 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 NENFQ9UMX5 172 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 PCDHB11Q9Y5F2 797 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 DOPEY2Q9Y3R5 2298 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 PRSS38A1L453 326 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 A8MX80 341 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 TNFRSF10CO14798 259 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 WISP1O95388 367 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 ITGB2P05107 769 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 CSNK1DP48730 415 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 ZBED6P86452 979 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 BIRC2Q13490 618 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 HLTFQ14527 1009 aaKnown RBP eCLIP14.77□□□□□ -0.05
PNKP-202ENST00000593706 OGFOD3Q6PK18 319 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 DPPA4Q7L190 304 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 SFTPA2Q8IWL1 248 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 EXD3Q8N9H8 876 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 FNIP1Q8TF40 1166 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 IQCDQ96DY2 449 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 PEBP4Q96S96 227 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 TRIM4Q9C037 500 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 SLC39A8Q9C0K1 460 aa14.77□□□□□ -0.05
PNKP-202ENST00000593706 EIF3CLB5ME19 914 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 GOLGA6L19H0YKK7 550 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 NUDT21O43809 227 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 PSMA2P25787 234 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 HNRNPH3P31942 346 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 ETV5P41161 510 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 SCNN1BP51168 640 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 AP1S1P61966 158 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 ZFP36L1Q07352 338 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 PPP6R3Q5H9R7 873 aaPredicted RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 TMEM164Q5U3C3 297 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 ZFAND4Q86XD8 727 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 CCL4L1Q8NHW4 92 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 PDCD6IPQ8WUM4 868 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 USP7Q93009 1102 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 ECHDC3Q96DC8 303 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 NUS1Q96E22 293 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 EIF3CQ99613 913 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 LGR4Q9BXB1 951 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 XPO4Q9C0E2 1151 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 CARS2Q9HA77 564 aaKnown RBP14.76□□□□□ -0.05
PNKP-202ENST00000593706 RDH14Q9HBH5 336 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 FOXJ2Q9P0K8 574 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 PCSK1NQ9UHG2 260 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 PCDHGA4Q9Y5G9 962 aa14.76□□□□□ -0.05
PNKP-202ENST00000593706 GOLGA6CA6NDK9 693 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 RHPN2P1A8MT19 583 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 ZW10O43264 779 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 CPNE6O95741 557 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 FAM87AP0C7U9 286 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 GOLGA6DP0CG33 693 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 MYBL1P10243 752 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 MYCLP1P12525 358 aaPredicted RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 CD82P27701 267 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 MAZP56270 477 aaKnown RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 ILF3Q12906 894 aaKnown RBP eCLIP14.75□□□□□ -0.05
PNKP-202ENST00000593706 ZNF235Q14590 738 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 CA9Q16790 459 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 LINC00303Q3SY05 128 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 AMZ1Q400G9 498 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 ERMARDQ5T6L9 678 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 DENND2CQ68D51 928 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 PNCKQ6P2M8 343 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 XKR5Q6UX68 686 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 ARHGAP36Q6ZRI8 547 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 RFX8Q6ZV50 586 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 TMPRSS9Q7Z410 1059 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 PIM3Q86V86 326 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 HEATR4Q86WZ0 1026 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 SLITRK4Q8IW52 837 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 ZNF653Q96CK0 615 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 SNRNP25Q9BV90 132 aaKnown RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 GSDMCQ9BYG8 508 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 ZMYND15Q9H091 742 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 SEMA6CQ9H3T2 930 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 PHPT1Q9NRX4 125 aaPredicted RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 GOLGA6AQ9NYA3 693 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 B4GALT6Q9UBX8 382 aa14.75□□□□□ -0.05
PNKP-202ENST00000593706 CNOT8Q9UFF9 292 aaKnown RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 BZW2Q9Y6E2 419 aaKnown RBP14.75□□□□□ -0.05
PNKP-202ENST00000593706 A0A087X0T9 212 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms