RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ARHGAP6O43182 974 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 FGF1P05230 155 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 MYCLP1P12525 358 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-212ENST00000593251 CCNB1P14635 433 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 ITGB6P18564 788 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 AK4P27144 223 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-212ENST00000593251 IL10RBQ08334 325 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 SLC10A7Q0GE19 358 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 MAMLD1Q13495 774 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 CNGA3Q16281 694 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 TBR1Q16650 682 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 ZNF574Q6ZN55 896 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-212ENST00000593251 PIM3Q86V86 326 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 DTX1Q86Y01 620 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 KIAA1524Q8TCG1 905 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 GPBAR1Q8TDU6 330 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 PDCD6IPQ8WUM4 868 aaKnown RBP17.49■□□□□ 0.39
RETREG3-212ENST00000593251 PATE1Q8WXA2 126 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 HTR3CQ8WXA8 447 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 STARD5Q9NSY2 213 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
RETREG3-212ENST00000593251 PCDHB11Q9Y5F2 797 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 PCDHGC4Q9Y5F7 938 aa17.49■□□□□ 0.39
RETREG3-212ENST00000593251 A0A1W2PQC6 194 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 RHPN2P1A8MT19 583 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 ECEL1O95672 775 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 CPNE6O95741 557 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 CEACAM5P06731 702 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 GNPDA1P46926 289 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 AP1S1P61966 158 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
RETREG3-212ENST00000593251 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
RETREG3-212ENST00000593251 PTPRRQ15256 657 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 TSR1Q2NL82 804 aaKnown RBP17.48■□□□□ 0.39
RETREG3-212ENST00000593251 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 ZSCAN1Q8NBB4 408 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 PMEPA1Q969W9 287 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 TRIM7Q9C029 511 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 TAAR2Q9P1P5 351 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 IL17BQ9UHF5 180 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 ST14Q9Y5Y6 855 aa17.48■□□□□ 0.39
RETREG3-212ENST00000593251 MAST4O15021 2626 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 GOLGA6CA6NDK9 693 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 GOLGA6BA6NDN3 693 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 PDE2AO00408 941 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 GOLGA6DP0CG33 693 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 FERP16591 822 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 ETV3P41162 512 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 POLD2P49005 469 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 CSRP3P50461 194 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 ILF3Q12906 894 aaKnown RBP eCLIP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 CYP4V2Q6ZWL3 525 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 C17orf82Q86X59 251 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 ANKRD20A12PQ8NF67 263 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 CCDC74BQ96LY2 380 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 PSKH2Q96QS6 385 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 ERGIC2Q96RQ1 377 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 GSDMCQ9BYG8 508 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 FRMD8Q9BZ67 464 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 PHPT1Q9NRX4 125 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 GOLGA6AQ9NYA3 693 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 CWC15Q9P013 229 aaKnown RBP17.47■□□□□ 0.39
RETREG3-212ENST00000593251 SEPT3Q9UH03 358 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 SUFUQ9UMX1 484 aa17.47■□□□□ 0.39
RETREG3-212ENST00000593251 UBR5O95071 2799 aaPredicted RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 TLN1Q9Y490 2541 aaKnown RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 IGHV5-10-1A0A0J9YXX1 117 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 A0A0U1RQS6 177 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 EIF3CLB5ME19 914 aaKnown RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 TERTO14746 1132 aaKnown RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 CPP00450 1065 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 CD1CP29017 333 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 MIPP30301 263 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 VIPR1P32241 457 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 RENBPP51606 427 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 ARSDP51689 593 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 ZNF235Q14590 738 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 CLCA4Q14CN2 919 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 TMEM164Q5U3C3 297 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 NKAIN2Q5VXU1 208 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 XKR5Q6UX68 686 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 ATG14Q6ZNE5 492 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 ZNF438Q7Z4V0 828 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 IRF2BP2Q7Z5L9 587 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 PGBD5Q8N414 524 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 EIF3CQ99613 913 aaKnown RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 SYT11Q9BT88 431 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 TEX101Q9BY14 249 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 AKAP7Q9P0M2 348 aaPredicted RBP17.46■□□□□ 0.39
RETREG3-212ENST00000593251 PLEKHM1Q9Y4G2 1056 aa17.46■□□□□ 0.39
RETREG3-212ENST00000593251 COL12A1Q99715 3063 aa17.46■□□□□ 0.38
RETREG3-212ENST00000593251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.45■□□□□ 0.38
RETREG3-212ENST00000593251 TMEM191CA6NGB0 347 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms