RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 CCDC74AQ96AQ1 378 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 DTD2Q96FN9 168 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 SCRN2Q96FV2 425 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 DNAJC7Q99615 494 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 PRORYQ9H606 182 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 NT5MQ9NPB1 228 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 SATB2Q9UPW6 733 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 A0A1W2PNU3 283 aaPredicted RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 NPIPB15A6NHN6 443 aaPredicted RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 H2AFZP0C0S5 128 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 MAN1A1P33908 653 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 GJC1P36383 396 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 TLE3Q04726 772 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 CCDC173Q0VFZ6 552 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 TRIM14Q14142 442 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 PDK2Q15119 407 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 ASTE1Q2TB18 679 aaPredicted RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 C3orf38Q5JPI3 329 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 ALG1LQ6GMV1 187 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 USP45Q70EL2 814 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 H2AFVQ71UI9 128 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 SPACA3Q8IXA5 215 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 GPR156Q8NFN8 814 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 FAF2Q96CS3 445 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 SEMA3CQ99985 751 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 LGR4Q9BXB1 951 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 POLR1EQ9GZS1 481 aaKnown RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 MRPL40Q9NQ50 206 aaKnown RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 PHPT1Q9NRX4 125 aaPredicted RBP23.29■■□□□ 1.32
MBD3-211ENST00000592965 THSD1Q9NS62 852 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 PPIL1Q9Y3C6 166 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 PCDHGA8Q9Y5G5 932 aa23.29■■□□□ 1.32
MBD3-211ENST00000592965 CASC3O15234 703 aaKnown RBP23.28■■□□□ 1.32
MBD3-211ENST00000592965 KRT7P08729 469 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TEAD1P28347 426 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TAS2R40P59535 323 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TSR1Q2NL82 804 aaKnown RBP23.28■■□□□ 1.32
MBD3-211ENST00000592965 ATP13A4Q4VNC1 1196 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 ANKRD20A8PQ5CZ79 823 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 SPECC1LQ69YQ0 1117 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TIGD7Q6NT04 549 aaPredicted RBP23.28■■□□□ 1.32
MBD3-211ENST00000592965 HSD11B1LQ7Z5J1 315 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 MAP7D3Q8IWC1 876 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 KCTD6Q8NC69 237 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 OR8K1Q8NGG5 319 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 PIH1D2Q8WWB5 315 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TSGA13Q96PP4 275 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 LGMNQ99538 433 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 PACSIN1Q9BY11 444 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 TEX101Q9BY14 249 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 AMACRQ9UHK6 382 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 RABGEF1Q9UJ41 708 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 RAI2Q9Y5P3 530 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 AHCTF1Q8WYP5 2266 aa23.28■■□□□ 1.32
MBD3-211ENST00000592965 SSU72P8A0A1W2PR75 194 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 PRSS38A1L453 326 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 CBFA2T2O43439 604 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 FZD6O60353 706 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 ETV3P41162 512 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 OGFOD3Q6PK18 319 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 TAF8Q7Z7C8 310 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 HEATR4Q86WZ0 1026 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 BBC3Q96PG8 261 aaPredicted RBP23.27■■□□□ 1.32
MBD3-211ENST00000592965 TMEM168Q9H0V1 697 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 CYP4F12Q9HCS2 524 aa23.27■■□□□ 1.32
MBD3-211ENST00000592965 D6RAR5 112 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 MATN3O15232 486 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 TMEM253P0C7T8 217 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 KRT10P13645 584 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 CES1P23141 567 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 MLLT3P42568 568 aaPredicted RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 ARHGEF7Q14155 803 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 IFI16Q16666 785 aaKnown RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 SKOR2Q2VWA4 1001 aaPredicted RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 CERCAMQ5T4B2 595 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 DENND2CQ68D51 928 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 TSPAN33Q86UF1 283 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 NDUFAF2Q8N183 169 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 FAM46DQ8NEK8 389 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 WDR36Q8NI36 951 aaKnown RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 PRR11Q96HE9 360 aaPredicted RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 SLC46A1Q96NT5 459 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 FRMD8Q9BZ67 464 aaPredicted RBP23.26■■□□□ 1.31
MBD3-211ENST00000592965 SYNDIG1Q9H7V2 258 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 HAUS2Q9NVX0 235 aa23.26■■□□□ 1.31
MBD3-211ENST00000592965 ATMQ13315 3056 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 CCDC187A0A096LP49 1063 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 NOBOXO60393 691 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 PDHA1P08559 390 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 MX2P20592 715 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 CCNCP24863 283 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 RBMS1P29558 406 aaKnown RBP23.25■■□□□ 1.31
MBD3-211ENST00000592965 CDK3Q00526 305 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 DPTQ07507 201 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 ITKQ08881 620 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 Q6ZVL8 140 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 TECPR1Q7Z6L1 1165 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 PQLC3Q8N755 202 aa23.25■■□□□ 1.31
MBD3-211ENST00000592965 LIN37Q96GY3 246 aaPredicted RBP23.25■■□□□ 1.31
MBD3-211ENST00000592965 FCRL3Q96P31 734 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms