RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 DOK1Q99704 481 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 AKTIPQ9H8T0 292 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 CD320Q9NPF0 282 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ACTR3BQ9P1U1 418 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 VWA7Q9Y334 891 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 BPTFQ12830 3046 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 SUPT7LO94864 414 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 FGF4P08620 206 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 KCNC1P48547 511 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 CCT8P50990 548 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 SEPT6Q14141 434 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 LYSMD3Q7Z3D4 306 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 ISCA2Q86U28 154 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 ANKRD13AQ8IZ07 590 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 GPC2Q8N158 579 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 TMEM86AQ8N2M4 240 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 SMYD1Q8NB12 490 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 RNF34Q969K3 372 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 PPP1R10Q96QC0 940 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 NPLQ9BXD5 320 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 RBM22Q9NW64 420 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 AURKCQ9UQB9 309 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 IGLV3-25P01717 112 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 HTR7P34969 479 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 SPPL2CQ8IUH8 684 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 MYRFLQ96LU7 910 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 ATXN3LQ9H3M9 355 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 CSNK1G1Q9HCP0 422 aa14.88□□□□□ -0.03
SMARCA4-219ENST00000592604 DICER1Q9UPY3 1922 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 TTC24A2A3L6 582 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ADM5C9JUS6 153 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 FXYD1O00168 92 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ACOX3O15254 700 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 RASAL1O95294 804 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 MT-CO1P00395 513 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 PSMA4P25789 261 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 BAG6P46379 1132 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ARTNQ5T4W7 220 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 TIGD7Q6NT04 549 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 TMEM207Q6UWW9 146 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ADGRG5Q8IZF4 528 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 DHRS1Q96LJ7 313 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ASB2Q96Q27 587 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CMTM6Q9NX76 183 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CDC14AQ9UNH5 594 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 TRIM64BA6NI03 449 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 HNRNPCP07910 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SMIM10L2AP0DMW4 78 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SMIM10L2BP0DMW5 78 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 MANEALQ5VSG8 457 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 KDELC1Q6UW63 502 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CMTR2Q8IYT2 770 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SCML4Q8N228 414 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 TRPV3Q8NET8 790 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 OR6J1Q8NGC5 347 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SEPT8Q92599 483 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SMARCD1Q96GM5 515 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CYP2S1Q96SQ9 504 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 SIK2Q9H0K1 926 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ALG9Q9H6U8 611 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CATSPERBQ9H7T0 1116 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 CXorf21Q9HAI6 301 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 ATP13A1Q9HD20 1204 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 DNAJC15Q9Y5T4 150 aa14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 NYNRINQ9P2P1 1898 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-219ENST00000592604 PAPSS2O95340 614 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 MATN4O95460 622 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 UGT1A6P19224 532 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 CAPN3P20807 821 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC6A2P23975 617 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 DCKP27707 260 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 WNT3AP56704 352 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 HERVK_113P63132 956 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 SH3BP2P78314 561 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 COQ5Q5HYK3 327 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 TMTC4Q5T4D3 741 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 FAM219BQ5XKK7 198 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 CILP2Q8IUL8 1156 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 PHYKPLQ8IUZ5 450 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 ERVK-6Q9BXR3 956 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 MUC3BQ9H195 1237 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 CDH9Q9ULB4 789 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 TMEM98Q9Y2Y6 226 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 MIA3Q5JRA6 1907 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 PLXNB2O15031 1838 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 RNF103-CHMP3A0A140T963 221 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 DYTNA2CJ06 578 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 FAM149AA5PLN7 773 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 NR5A2O00482 541 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 GPIP06744 558 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 TSPAN8P19075 237 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 HMOX2P30519 316 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 RAB15P59190 212 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms