RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CBR4Q8N4T8 237 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 PLEKHG4BQ96PX9 1271 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ARL5CA6NH57 179 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 DLX3O60479 287 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 BROXQ5VW32 411 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 PLGRKTQ9HBL7 147 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 MKS1Q9NXB0 559 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 KAT6AQ92794 2004 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 A0A088AWK7 358 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ZNF487B1APH4 448 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 FZD9O00144 591 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 DLGAP3O95886 979 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 AHSGP02765 367 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 CSTF3Q12996 717 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 OSTM1Q86WC4 334 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 DENND1CQ8IV53 801 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 KIAA2013Q8IYS2 634 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 RORBQ92753 470 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ZBTB48P10074 688 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 S100A3P33764 101 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 SREBF2Q12772 1141 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ARMC12Q5T9G4 340 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ZNF483Q8TF39 744 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 FTHL17Q9BXU8 183 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 MOCS1Q9NZB8 636 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 CKMP06732 381 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GSSP48637 474 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GHRHRQ02643 423 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 TUSC3Q13454 348 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 HERC3Q15034 1050 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 IL23RQ5VWK5 629 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 RTL3Q8N8U3 475 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SCAMP5Q8TAC9 235 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 KCTD13Q8WZ19 329 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 FCRL5Q96RD9 977 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GMIPQ9P107 970 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 FADS3Q9Y5Q0 445 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 ELAVL2Q12926 359 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 ADHFE1Q8IWW8 467 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 ZMAT2Q96NC0 199 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 CAMKK2Q96RR4 588 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 TMCO1Q9UM00 188 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SERPIND1P05546 499 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 DGKAP23743 735 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 MC4RP32245 332 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 PLCL1Q15111 1095 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 MAPKAPK3Q16644 382 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SPESP1Q6UW49 350 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GCNT7Q6ZNI0 430 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SLC2A6Q9UGQ3 507 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 PIP5K1BO14986 540 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 ETV4P43268 484 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GANCQ8TET4 914 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 TPD52L3Q96J77 140 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GNG14A0A1W2PPG7 69 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 DHRS4L1P0CG22 281 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 LPOP22079 712 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 GMPRP36959 345 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 PROSER1Q86XN7 944 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 SFRP1Q8N474 314 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 BPIFB6Q8NFQ5 453 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 DHRS4Q9BTZ2 278 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
SMARCA4-215ENST00000590574 BTAF1O14981 1849 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 UBXN8O00124 270 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 RHOQP17081 205 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 HTR7P34969 479 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 GALK1P51570 392 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 NAA20P61599 178 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TTC23Q5W5X9 447 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 NPY6RQ99463 290 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 GPR22Q99680 433 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 POLR3HQ9Y535 204 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 MGAT4DA6NG13 374 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 NRP1O14786 923 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 GOT2P00505 430 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 CST1P01037 141 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 MT-ND1P03886 318 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 HLA-DQB2P05538 268 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 PROZP22891 400 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 HCAR3P49019 387 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 ITGADQ13349 1161 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 BOP1Q14137 746 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 SETD9Q8NE22 299 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms