RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 KDM1BQ8NB78 822 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 SMOC2Q9H3U7 446 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 ZNF221Q9UK13 617 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 ANGPTL3Q9Y5C1 460 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 A8MUA0 341 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 ARPC2O15144 300 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 USP2O75604 605 aaPredicted RBP15.21■□□□□ 0.02
CIRBP-228ENST00000590347 ALX3O95076 343 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 POLR2EP19388 210 aaKnown RBP15.21■□□□□ 0.02
CIRBP-228ENST00000590347 GMPSP49915 693 aaPredicted RBP15.21■□□□□ 0.02
CIRBP-228ENST00000590347 TNFAIP2Q03169 654 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 PRKAA1Q13131 559 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 STX5Q13190 355 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 ADGRG5Q8IZF4 528 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 FSTL5Q8N475 847 aaPredicted RBP15.21■□□□□ 0.02
CIRBP-228ENST00000590347 COLGALT1Q8NBJ5 622 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 CCNYQ8ND76 341 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 TTC16Q8NEE8 873 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 MED30Q96HR3 178 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 TXNDC15Q96J42 360 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 B3GNT4Q9C0J1 378 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 FBXO40Q9UH90 709 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 TESMINQ9Y4I5 508 aa15.21■□□□□ 0.02
CIRBP-228ENST00000590347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 PDZK1P1A8MUH7 402 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 KCNK1O00180 336 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 UGT2B11O75310 529 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 EDN1P05305 212 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 GSNP06396 782 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 PRKACGP22612 351 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 PIGAP37287 484 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 SLC12A2P55011 1212 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 STX1BP61266 288 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 TFDP2Q14188 446 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 HABP4Q5JVS0 413 aaKnown RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 SLC41A1Q8IVJ1 513 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 MCUQ8NE86 351 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 OR5H6Q8NGV6 325 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 CNIH3Q8TBE1 160 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 CHURC1Q8WUH1 139 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 TRIB2Q92519 343 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 TLR9Q9NR96 1032 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 LRIG2O94898 1065 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 CRHBPP24387 322 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 HTR2BP41595 481 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 SLC26A2P50443 739 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 INPP5AQ14642 412 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 USP10Q14694 798 aaKnown RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 CTU2Q2VPK5 515 aaKnown RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 PYROXD2Q8N2H3 581 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 DNAAF3Q8N9W5 541 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 EXT2Q93063 718 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 FEM1AQ9BSK4 669 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 PAK1IP1Q9NWT1 392 aaPredicted RBP15.2■□□□□ 0.02
CIRBP-228ENST00000590347 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
CIRBP-228ENST00000590347 A0A0X1KG70 313 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 TRIM64A6NGJ6 449 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 M0QYV0 167 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RGS13O14921 159 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 OGTO15294 1046 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 DHX15O43143 795 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 POU6F2P78424 691 aaPredicted RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RFTN1Q14699 578 aaPredicted RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 MTERF2Q49AM1 385 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 INTS11Q5TA45 600 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 LIPMQ5VYY2 423 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 HEATR6Q6AI08 1181 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 NIPA2Q8N8Q9 360 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 APPL2Q8NEU8 664 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 NXNL1Q96CM4 212 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 KCTD14Q9BQ13 255 aaPredicted RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 TMPRSS4Q9NRS4 437 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 TLK1Q9UKI8 766 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SNX6Q9UNH7 406 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SYCE1LA8MT33 242 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 H3BMM5 538 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 EXTL3O43909 919 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CCNE2O96020 404 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 DBTP11182 482 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 MAGEA3P43357 314 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 FXNQ16595 210 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 ZFP69Q49AA0 526 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 FBXO48Q5FWF7 155 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CERCAMQ5T4B2 595 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 ARHGAP17Q68EM7 881 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 PDPRQ8NCN5 879 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 DNERQ8NFT8 737 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 OR6Q1Q8NGQ2 317 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 OSBPL2Q9H1P3 480 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 TMEM181Q9P2C4 612 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 HACL1Q9UJ83 578 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SNX5Q9Y5X3 404 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms