RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SCNN1AP37088 669 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 TRA2AQ13595 282 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 FHL5Q5TD97 284 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 ERAP2Q6P179 960 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 TMEM35BQ8NCS4 154 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 CCDC112Q8NEF3 446 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 JOSD2Q8TAC2 188 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 TBC1D31Q96DN5 1066 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 WDR26Q9H7D7 661 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 DNAJC12Q9UKB3 198 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 SUFUQ9UMX1 484 aa12.78□□□□□ -0.36
PRKCSH-210ENST00000589990 ESPL1Q14674 2120 aa12.77□□□□□ -0.36
PRKCSH-210ENST00000589990 RASA4BC9J798 803 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 J3KR12 359 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 BIN1O00499 593 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 RASA4O43374 803 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 DNAJB5O75953 348 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 STK17BO94768 372 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 EML2O95834 649 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 HOXC4P09017 264 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 POU3F2P20265 443 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 MAP4P27816 1152 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 STAT1P42224 750 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 GPR3P46089 330 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 SUOXP51687 545 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 SNX16P57768 344 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 CTBSQ01459 385 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 CLPPQ16740 277 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 DPY19L2P1Q6NXN4 242 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 TMEM71Q6P5X7 295 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 ASB18Q6ZVZ8 466 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 FAM71AQ8IYT1 594 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 RXFP2Q8WXD0 754 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 KIAA1143Q96AT1 154 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 GSDMCQ9BYG8 508 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 PDFQ9HBH1 243 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 TLK1Q9UKI8 766 aa12.77□□□□□ -0.37
PRKCSH-210ENST00000589990 POLQO75417 2590 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 VPS4BO75351 444 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 CLDN1O95832 211 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 GNA14O95837 355 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 DLGAP3O95886 979 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ELFN1P0C7U0 828 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 MYCLP1P12525 358 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 CYP11B1P15538 503 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ZNF28P17035 718 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 KELP23276 732 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 DCTP40126 519 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 STAT5AP42229 794 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 HDAC4P56524 1084 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 RAB15P59190 212 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 MC2RQ01718 297 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ABHD18Q0P651 414 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 BIRC2Q13490 618 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 SQSTM1Q13501 440 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 SEPT6Q14141 434 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 ERV3-1Q14264 604 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 PTPRRQ15256 657 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 KDELC2Q7Z4H8 507 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 RTL3Q8N8U3 475 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 HCAR2Q8TDS4 363 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 FRMD8Q9BZ67 464 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 PRDM8Q9NQV8 689 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 PDP2Q9P2J9 529 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 VPS4AQ9UN37 437 aa12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 TMEM184BQ9Y519 407 aaPredicted RBP12.76□□□□□ -0.37
PRKCSH-210ENST00000589990 BICDL2A1A5D9 508 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TTC24A2A3L6 582 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TTLL8A6PVC2 850 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 ADCY8P40145 1251 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 ACOX1Q15067 660 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 C2CD3Q4AC94 2353 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 AFMIDQ63HM1 303 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 BRAT1Q6PJG6 821 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 ARHGAP22Q7Z5H3 698 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 CCDC13Q8IYE1 715 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 GALNT11Q8NCW6 608 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms