RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SYN2Q92777 582 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 WDR26Q9H7D7 661 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 SPATS2LQ9NUQ6 558 aaKnown RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 ANAPC7Q9UJX3 599 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 ATXN7L1Q9ULK2 861 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 NENFQ9UMX5 172 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 RNF215Q9Y6U7 377 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 CCDC187A0A096LP49 1063 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 TEX51A0A1B0GUA7 166 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 PRSS38A1L453 326 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 TNFRSF10CO14798 259 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 SOCS5O75159 536 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 SERPING1P05155 500 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 CEACAM5P06731 702 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 PDHA1P08559 390 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 HGFP14210 728 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 VIPR1P32241 457 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 MMP13P45452 471 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 HLTFQ14527 1009 aaKnown RBP eCLIP18.02■□□□□ 0.48
H3F3B-209ENST00000589949 CERCAMQ5T4B2 595 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 Q6ZVL8 140 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 ATPAF2Q8N5M1 289 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 TEX26Q8N6G2 289 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 ATL2Q8NHH9 583 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 WDR48Q8TAF3 677 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 FAM71BQ8TC56 605 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 LRRN4Q8WUT4 740 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 PIH1D2Q8WWB5 315 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 NUS1Q96E22 293 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 DTD2Q96FN9 168 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 LIN37Q96GY3 246 aaPredicted RBP18.02■□□□□ 0.48
H3F3B-209ENST00000589949 GFM1Q96RP9 751 aaKnown RBP18.02■□□□□ 0.48
H3F3B-209ENST00000589949 TEX101Q9BY14 249 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 LRRN3Q9H3W5 708 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 SUDS3Q9H7L9 328 aaPredicted RBP18.02■□□□□ 0.48
H3F3B-209ENST00000589949 IP6K2Q9UHH9 426 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 CAPN11Q9UMQ6 739 aa18.02■□□□□ 0.48
H3F3B-209ENST00000589949 EIF4E1BA6NMX2 242 aaKnown RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 B4DGG1 531 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 TK2O00142 265 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 AGRPO00253 132 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 MFSD11O43934 449 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 PGLSO95336 258 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 MAP3K6O95382 1288 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 GYPCP04921 128 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 MYCLP1P12525 358 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 CTPS1P17812 591 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 HSPA9P38646 679 aaKnown RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 POLD2P49005 469 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 CDH6P55285 790 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 ZBED6P86452 979 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 SPECC1LQ69YQ0 1117 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 HEATR4Q86WZ0 1026 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 CCNJLQ8IV13 435 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 MCCC1Q96RQ3 725 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 FRMD8Q9BZ67 464 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 DPH1Q9BZG8 443 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 EPB41L5Q9HCM4 733 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 MOSPD1Q9UJG1 213 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 APPL1Q9UKG1 709 aa18.01■□□□□ 0.47
H3F3B-209ENST00000589949 BZW2Q9Y6E2 419 aaKnown RBP18.01■□□□□ 0.47
H3F3B-209ENST00000589949 PLD2O14939 933 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 EFSO43281 561 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 SOD1P00441 154 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 GLB1P16278 677 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 KELP23276 732 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 UGT1A5P35504 534 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 UBASH3AP57075 661 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 TMPRSS3P57727 454 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 ZFP36L1Q07352 338 aaKnown RBP18■□□□□ 0.47
H3F3B-209ENST00000589949 CLN3Q13286 438 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 C14orf28Q4W4Y0 310 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 MARC1Q5VT66 337 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 NCBP2-AS2Q69YL0 99 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 SPRED1Q7Z699 444 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 TECPR1Q7Z6L1 1165 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 ARL14Q8N4G2 192 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 GPBAR1Q8TDU6 330 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 SCRN2Q96FV2 425 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 DPEP2Q9H4A9 486 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 CARS2Q9HA77 564 aaKnown RBP18■□□□□ 0.47
H3F3B-209ENST00000589949 NT5MQ9NPB1 228 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 PHTF1Q9UMS5 762 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 PPIL1Q9Y3C6 166 aa18■□□□□ 0.47
H3F3B-209ENST00000589949 ARHGEF17Q96PE2 2063 aaPredicted RBP18■□□□□ 0.47
H3F3B-209ENST00000589949 B4GAT1O43505 415 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 FZD6O60353 706 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 FGF1P05230 155 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 ITGA2BP08514 1039 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 PTMSP20962 102 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 AK4P27144 223 aaPredicted RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 INHBCP55103 352 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 MAZP56270 477 aaKnown RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 TAS2R40P59535 323 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 CDK3Q00526 305 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 B4GALNT1Q00973 533 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 SRSF6Q13247 344 aaKnown RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 DPYSL3Q14195 570 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 CCDC122Q5T0U0 273 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 FAM182AQ5T1J6 154 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms