RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ACTL7AQ9Y615 435 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 PIPSLA2A3N6 862 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TMEM110-MUSTN1A8MSY1 372 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 A8MU76 341 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 E2F3O00716 465 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 DPM1O60762 260 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 LRCH4O75427 683 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 KATNA1O75449 491 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ZMPSTE24O75844 475 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 FAM155BO75949 473 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TM7SF2O76062 418 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 CD160O95971 181 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 RECKO95980 971 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TNFP01375 233 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 DRD2P14416 443 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 HTR1BP28222 390 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 CLCN1P35523 988 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 GPR3P46089 330 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 GCLMP48507 274 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 SERPINH1P50454 418 aaKnown RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 CCL11P51671 97 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 KRT83P78385 493 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 FANCCQ00597 558 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 UBXN1Q04323 297 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 CDK18Q07002 472 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 IL10RAQ13651 578 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 TRIM14Q14142 442 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 LRRC14Q15048 493 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 KRT31Q15323 416 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 CHRNA6Q15825 494 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 EXOC3L4Q17RC7 722 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 C5orf22Q49AR2 442 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 VWA3BQ502W6 1294 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ALFQ53S48 1182 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ZNF805Q5CZA5 627 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 CDKAL1Q5VV42 579 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TMEM71Q6P5X7 295 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TRIM59Q8IWR1 403 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 IQCKQ8N0W5 287 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 NAGSQ8N159 534 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 PLA2G15Q8NCC3 412 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 FBXL13Q8NEE6 735 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ZNF397Q8NF99 534 aaPredicted RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 FDCSPQ8NFU4 85 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 NEK11Q8NG66 645 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 OR56A4Q8NGH8 313 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TFAP2BQ92481 460 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 NT5C1BQ96P26 610 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 PPP1R9BQ96SB3 815 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 ULBP3Q9BZM4 244 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 MIS12Q9H081 205 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ING2Q9H160 280 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 VPS16Q9H269 839 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 NDST4Q9H3R1 872 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 ACTL8Q9H568 366 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 TAB2Q9NYJ8 693 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 HESX1Q9UBX0 185 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 LIMA1Q9UHB6 759 aaKnown RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 VANGL2Q9ULK5 521 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 FCF1Q9Y324 198 aaKnown RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 ZNF451Q9Y4E5 1061 aa6.11□□□□□ -1.43
VPS25-204ENST00000589577 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS25-204ENST00000589577 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
VPS25-204ENST00000589577 PIKFYVEQ9Y2I7 2098 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 GTPBP10A4D1E9 387 aaKnown RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 ARGFXA6NJG6 315 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 LGALS16A8MUM7 142 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 I6L893 689 aaPredicted RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 POLR1CO15160 346 aaPredicted RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 INPP4BO15327 924 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 CLDN11O75508 207 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 TRUB2O95900 331 aaKnown RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 FUCA1P04066 466 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 CCDC172P0C7W6 258 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 TBXAS1P24557 533 aaPredicted RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 FMO5P49326 533 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 PER3P56645 1201 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 KIAA1024LP59773 190 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 RPS18P62269 152 aaKnown RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 ARF5P84085 180 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 ART3Q13508 389 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 DNASE1L3Q13609 305 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 UGT8Q16880 541 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 CARD16Q5EG05 197 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 SNAP47Q5SQN1 464 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 SARM1Q6SZW1 724 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 LCLAT1Q6UWP7 414 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 LYSMD3Q7Z3D4 306 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 SLC47A2Q86VL8 602 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 ZNF761Q86XN6 746 aaPredicted RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 ZNF683Q8IZ20 524 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 PELI3Q8N2H9 469 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 TTC39CQ8N584 583 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 PCDH20Q8N6Y1 951 aaKnown RBP6.1□□□□□ -1.43
VPS25-204ENST00000589577 UBR7Q8N806 425 aa6.1□□□□□ -1.43
VPS25-204ENST00000589577 ATP6V0D2Q8N8Y2 350 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms