RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TIMP2P16035 220 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 HLA-DPA1P20036 260 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ME2P23368 584 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ARNTP27540 789 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CDC25CP30307 473 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 OR1E1P30953 314 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MAPKAPK2P49137 400 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RING1Q06587 406 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 TNK2Q07912 1038 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 EFEMP1Q12805 493 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FLOT2Q14254 428 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RFTN1Q14699 578 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PDCD2Q16342 344 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MMEL1Q495T6 779 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CTXN3Q4LDR2 81 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MS4A13Q5J8X5 152 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 TCHHL1Q5QJ38 904 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RARS2Q5T160 578 aaKnown RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF280DQ6N043 979 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FAM45BPQ6NSW5 357 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 KDELC1Q6UW63 502 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 TFAP2DQ7Z6R9 452 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SAPCD2Q86UD0 394 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 KBTBD6Q86V97 674 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 KLHDC9Q8NEP7 349 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FAM45AQ8TCE6 357 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GATA6Q92908 595 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 HMCESQ96FZ2 354 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 LRGUKQ96M69 825 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GLT1D1Q96MS3 346 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RPRD1AQ96P16 312 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GPR78Q96P69 363 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GBP5Q96PP8 586 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CDRT15Q96T59 188 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MFSD1Q9H3U5 465 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 NMUR1Q9HB89 426 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ZDHHC7Q9NXF8 308 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 UTP6Q9NYH9 597 aaKnown RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MARCH2Q9P0N8 246 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SLC2A6Q9UGQ3 507 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SCN10AQ9Y5Y9 1956 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 DOCK3Q8IZD9 2030 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 NUP205Q92621 2012 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 IGLV3-10A0A075B6K4 115 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 XYLBO75191 536 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 FGF1P05230 155 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ITGB1P05556 798 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CELA3AP09093 270 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CALRP27797 417 aaKnown RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 GMPRP36959 345 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 NAA20P61599 178 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CACNB2Q08289 660 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 DSC1Q08554 894 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ELAVL2Q12926 359 aaKnown RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 RAB33AQ14088 237 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CCNIQ14094 377 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF235Q14590 738 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 TRIP10Q15642 601 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 SLC14A2Q15849 920 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 DDR2Q16832 855 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 C10orf120Q5SQS8 335 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PIK3R6Q5UE93 754 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 CNSTQ6PJW8 725 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 C14orf80Q86SX3 495 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ST13P4Q8IZP2 240 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 TEX26Q8N6G2 289 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 SPPL2BQ8TCT7 592 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 GDPD5Q8WTR4 605 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PPP1R36Q96LQ0 422 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 TMEM74Q96NL1 305 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF599Q96NL3 588 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 BTBD9Q96Q07 612 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 WDR41Q9HAD4 459 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PFDN4Q9NQP4 134 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 UXTQ9UBK9 157 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PPT2Q9UMR5 302 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 PSMD13Q9UNM6 376 aa7.42□□□□□ -1.22
ZNF540-206ENST00000589117 MROH6A6NGR9 719 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 DRGXA6NNA5 263 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 H7C4K7 107 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 UBDO15205 165 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 CFLARO15519 480 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 TRPA1O75762 1119 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 ALDH2P05091 517 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 SERPINF2P08697 491 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 SBK3P0C264 359 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 RAG1P15918 1043 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 IMPDH1P20839 514 aa7.41□□□□□ -1.22
ZNF540-206ENST00000589117 CES1P23141 567 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms