RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CCT7Q99832 543 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ERVK-6Q9BXR3 956 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 YTHDF1Q9BYJ9 559 aaKnown RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SLC39A8Q9C0K1 460 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 PCDHAC1Q9H158 963 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SMOXQ9NWM0 555 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ACTR3BQ9P1U1 418 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ZNF225Q9UK10 706 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CAPN3P20807 821 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SLC6A2P23975 617 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 RCAN2Q14206 197 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ZBED5Q49AG3 693 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SCD5Q86SK9 330 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SLC15A3Q8IY34 581 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SMYD1Q8NB12 490 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 TSPAN14Q8NG11 270 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 HOPXQ9BPY8 73 aaPredicted RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 FAIMQ9NVQ4 179 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SUN2Q9UH99 717 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 PACSIN3Q9UKS6 424 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 MTF2Q9Y483 593 aaPredicted RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 MYBPHLA2RUH7 354 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SNRPB2P08579 225 aaKnown RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CPB1P15086 417 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 LHX1P48742 406 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 RAB15P59190 212 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SH3BP2P78314 561 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CCNA1P78396 465 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 STX5Q13190 355 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 MAPRE2Q15555 327 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 DGKDQ16760 1214 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CASC4Q6P4E1 433 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 DQX1Q8TE96 717 aaKnown RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 SLC25A23Q9BV35 468 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
KDM4B-208ENST00000589104 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 TSC22D4Q9Y3Q8 395 aa13.44□□□□□ -0.26
KDM4B-208ENST00000589104 ZFC3H1O60293 1989 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 KIF26AQ9ULI4 1882 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 SH3PXD2BA1X283 911 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 TMEM247A6NEH6 219 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 F5H423 210 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ANKRD28O15084 1053 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 RPS17P08708 135 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ATP6V1B1P15313 513 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 SAMD4BQ5PRF9 694 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 XAF1Q6GPH4 301 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 LAIR2Q6ISS4 152 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 FAM117BQ6P1L5 589 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 PGBD5Q8N414 524 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 BTN2A3PQ96KV6 586 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 FAF1Q9UNN5 650 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 NRP2O60462 931 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ANXA9O76027 345 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 MT-CYBP00156 380 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 LTA4HP09960 611 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 PSMD7P51665 324 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 DSC3Q14574 896 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 RWDD4Q6NW29 188 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 SLC22A9Q8IVM8 553 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 DPP10Q8N608 796 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 FAM156AQ8NDB6 213 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ISOC1Q96CN7 298 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 TKTL2Q9H0I9 626 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 SLC25A51Q9H1U9 297 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 E2F8A0AVK6 867 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 PSMD12O00232 456 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 EEDO75530 441 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 HNRNPFP52597 415 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 USP13Q92995 863 aaPredicted RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 CDCA5Q96FF9 252 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 NSMCE3Q96MG7 304 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 ACSS2Q9NR19 701 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 FBXO5Q9UKT4 447 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 IKZF3Q9UKT9 509 aa13.43□□□□□ -0.26
KDM4B-208ENST00000589104 DRGXA6NNA5 263 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 TSPAN12O95859 305 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 HDCP19113 662 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 HRH2P25021 359 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 CTBP1Q13363 440 aa13.42□□□□□ -0.26
KDM4B-208ENST00000589104 USP10Q14694 798 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms