RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CDKN2BP42772 138 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 COPS2P61201 443 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 IL10RBQ08334 325 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 SRSF6Q13247 344 aaKnown RBP15.79■□□□□ 0.12
NCLN-203ENST00000587740 TFDP2Q14188 446 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 TFDP3Q5H9I0 405 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 KAZNQ674X7 775 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 SLC9A4Q6AI14 798 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 LRRC49Q8IUZ0 686 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 TP53INP2Q8IXH6 220 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 SLC35F3Q8IY50 421 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 ATPAF2Q8N5M1 289 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 WDR36Q8NI36 951 aaKnown RBP15.79■□□□□ 0.12
NCLN-203ENST00000587740 LMX1AQ8TE12 382 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 UBE2Q2Q8WVN8 375 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 ISG20Q96AZ6 181 aaKnown RBP15.79■□□□□ 0.12
NCLN-203ENST00000587740 CCNL2Q96S94 520 aaPredicted RBP15.79■□□□□ 0.12
NCLN-203ENST00000587740 BOCQ9BWV1 1114 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 IL36AQ9UHA7 158 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 FADS3Q9Y5Q0 445 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 TERTO14746 1132 aaKnown RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 TPP1O14773 563 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 ADRB3P13945 408 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 MX2P20592 715 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 RABIFP47224 123 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 PEX5P50542 639 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 NEK3P51956 506 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 SNRPD1P62314 119 aaKnown RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 RPS21P63220 83 aaKnown RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 NFKB2Q00653 900 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 PDE1CQ14123 709 aaPredicted RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 RFTN1Q14699 578 aaPredicted RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 NR0B2Q15466 257 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 TAZQ16635 292 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 CARD16Q5EG05 197 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 KIAA1161Q6NSJ0 714 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 RBFAQ8N0V3 343 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 ARL14Q8N4G2 192 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 NSMCE1Q8WV22 266 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 PDFQ9HBH1 243 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 NCKIPSDQ9NZQ3 722 aa15.78■□□□□ 0.12
NCLN-203ENST00000587740 PACSIN2Q9UNF0 486 aaPredicted RBP15.78■□□□□ 0.12
NCLN-203ENST00000587740 hCG_1818297A0A087WSY0 165 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 CCDC187A0A096LP49 1063 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 H3BM21 787 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 NTN3O00634 580 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 NOBOXO60393 691 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 GSRP00390 522 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 ITGA2BP08514 1039 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 ITGB6P18564 788 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 PFN3P60673 137 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 RHOAP61586 193 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 DYNLT1P63172 113 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 GBE1Q04446 702 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 GALNT2Q10471 571 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 C1orf61Q13536 156 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 LLGL1Q15334 1064 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 CYTH1Q15438 398 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 TGIF1Q15583 401 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 PPP2R5EQ16537 467 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 B3GNT8Q7Z7M8 397 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 PLPP6Q8IY26 295 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 RYBPQ8N488 228 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 PLD5Q8N7P1 536 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 TRIM58Q8NG06 486 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 HES6Q96HZ4 224 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 ZNF599Q96NL3 588 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 LENG8Q96PV6 779 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 IL12RB2Q99665 862 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 CCDC3Q9BQI4 270 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 C1QTNF2Q9BXJ5 285 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 TM6SF2Q9BZW4 377 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 STARD5Q9NSY2 213 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 DTLQ9NZJ0 730 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 HECAQ9UBI9 543 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 ATXN7L1Q9ULK2 861 aaPredicted RBP15.77■□□□□ 0.12
NCLN-203ENST00000587740 HEY1Q9Y5J3 304 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 UNC13CQ8NB66 2214 aa15.77■□□□□ 0.12
NCLN-203ENST00000587740 IGLON5A6NGN9 336 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 MAFKO60675 156 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 CST8O60676 142 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 MAP3K6O95382 1288 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 IGSF6O95976 241 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 ITGB7P26010 798 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 SLC5A2P31639 672 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 GARSP41250 739 aaKnown RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 SLC10A2Q12908 348 aaPredicted RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 COLEC12Q5KU26 742 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 TMCO4Q5TGY1 634 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 TIGD7Q6NT04 549 aaPredicted RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 BZW1Q7L1Q6 419 aaKnown RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 PARS2Q7L3T8 475 aaKnown RBP15.76■□□□□ 0.11
NCLN-203ENST00000587740 BBS5Q8N3I7 341 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 OR2AP1Q8NGE2 309 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 VOPP1Q96AW1 172 aa15.76■□□□□ 0.11
NCLN-203ENST00000587740 PPP1R16AQ96I34 528 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms