RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 ANKRD20A12PQ8NF67 263 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 OR6C4Q8NGE1 309 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 SGF29Q96ES7 293 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 SNRNP25Q9BV90 132 aaKnown RBP6.43□□□□□ -1.38
SDF2-205ENST00000587629 FAM117AQ9C073 453 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 WDR26Q9H7D7 661 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 CARS2Q9HA77 564 aaKnown RBP6.43□□□□□ -1.38
SDF2-205ENST00000587629 LMBRD1Q9NUN5 540 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 PARVAQ9NVD7 372 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 LIMA1Q9UHB6 759 aaKnown RBP6.43□□□□□ -1.38
SDF2-205ENST00000587629 APPL1Q9UKG1 709 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 PCDHGC4Q9Y5F7 938 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 PCDHGA7Q9Y5G6 932 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 DGKBQ9Y6T7 804 aa6.43□□□□□ -1.38
SDF2-205ENST00000587629 CHD5Q8TDI0 1954 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 TRBV23OR9-2A0A075B6M9 112 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PRSS38A1L453 326 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 TMEM191CA6NGB0 347 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 RHPN2P1A8MT19 583 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 C9orf172C9J069 976 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 TRAFD1O14545 582 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 PRPSAP2O60256 369 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 RNF8O76064 485 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ECEL1O95672 775 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 FTLP02792 175 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 FGF1P05230 155 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 LIPCP11150 499 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CCL4P13236 92 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ATP1A3P13637 1013 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 FERP16591 822 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CTPS1P17812 591 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 WT1P19544 449 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 KELP23276 732 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 MPSTP25325 297 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 AK4P27144 223 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 MIPP30301 263 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CCKBRP32239 447 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ETV3P41162 512 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CSNK1DP48730 415 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PPM1FP49593 454 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 B4GALNT1Q00973 533 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 MYL5Q02045 173 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ZFP36L1Q07352 338 aaKnown RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 IL10RBQ08334 325 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 BIRC2Q13490 618 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 HLTFQ14527 1009 aaKnown RBP eCLIP6.42□□□□□ -1.38
SDF2-205ENST00000587629 LBRQ14739 615 aaKnown RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 C16orf72Q14CZ0 275 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 NKAIN2Q5VXU1 208 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 AFMIDQ63HM1 303 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 DOK6Q6PKX4 331 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 SASS6Q6UVJ0 657 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 HSD11B1LQ7Z5J1 315 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 IRF2BP2Q7Z5L9 587 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PIM3Q86V86 326 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 HEATR4Q86WZ0 1026 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 NRROSQ86YC3 692 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 SLITRK4Q8IW52 837 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PGBD5Q8N414 524 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ZDHHC1Q8WTX9 485 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PATE1Q8WXA2 126 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 HSPH1Q92598 858 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ECHDC3Q96DC8 303 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 NUS1Q96E22 293 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 COQ10AQ96MF6 247 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ERGIC2Q96RQ1 377 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CMKLR1Q99788 373 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 NUDT22Q9BRQ3 303 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CLMPQ9H6B4 373 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 NOD2Q9HC29 1040 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 DONSONQ9NYP3 566 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CWC15Q9P013 229 aaKnown RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 SEPT10Q9P0V9 454 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 TAAR2Q9P1P5 351 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 MYO1AQ9UBC5 1043 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 CD84Q9UIB8 345 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 TMEM98Q9Y2Y6 226 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PLEKHM1Q9Y4G2 1056 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 PCDHB11Q9Y5F2 797 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 HEMK1Q9Y5R4 338 aaPredicted RBP6.42□□□□□ -1.38
SDF2-205ENST00000587629 ST14Q9Y5Y6 855 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 LRRK1Q38SD2 2015 aa6.42□□□□□ -1.38
SDF2-205ENST00000587629 ANKRD36A6QL64 1941 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 IGHV5-10-1A0A0J9YXX1 117 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CFAP69A5D8W1 941 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 LRRC53A6NM62 1247 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 BHMG1C9JSJ3 638 aaPredicted RBP6.41□□□□□ -1.38
SDF2-205ENST00000587629 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
SDF2-205ENST00000587629 TNFRSF10CO14798 259 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 NUDT21O43809 227 aaKnown RBP6.41□□□□□ -1.38
SDF2-205ENST00000587629 WISP1O95388 367 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CPNE6O95741 557 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CPP00450 1065 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CEACAM5P06731 702 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CCDC172P0C7W6 258 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 MYCLP1P12525 358 aaPredicted RBP6.41□□□□□ -1.38
SDF2-205ENST00000587629 SKILP12757 684 aa6.41□□□□□ -1.38
SDF2-205ENST00000587629 CCNB1P14635 433 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms