RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ILF2Q12905 390 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 RBM20Q5T481 1227 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 DPY19L3Q6ZPD9 716 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 Q6ZVU0 165 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 SPATA21Q7Z572 469 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 MYLIPQ8WY64 445 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CPEB1Q9BZB8 566 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 BPIFA1Q9NP55 256 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 A0A0U1RQS6 177 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 KLF11O14901 512 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CISD3P0C7P0 127 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 BMP8BP34820 402 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 STC1P52823 247 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 SEMA3AQ14563 771 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 ZNF460Q14592 562 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CGB2Q6NT52 195 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 LYSMD3Q7Z3D4 306 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 LCA5Q86VQ0 697 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 C12orf40Q86WS4 652 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CYB5D2Q8WUJ1 264 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 SORCS1Q8WY21 1168 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 E2F7Q96AV8 911 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 ZDHHC6Q9H6R6 413 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CDH7Q9ULB5 785 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 CRYL1Q9Y2S2 319 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 USP15Q9Y4E8 981 aaPredicted RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 C5orf42Q9H799 3197 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 TULP3O75386 442 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 ATP5BP06576 529 aaKnown RBP19.85■□□□□ 0.77
TRIM47-204ENST00000587339 COL6A2P12110 1019 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 HOXB8P17481 243 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-204ENST00000587339 RECQLP46063 649 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-204ENST00000587339 DBN1Q16643 649 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 TYSND1Q2T9J0 566 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 OTOAQ7RTW8 1153 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 RAB3IL1Q8TBN0 382 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 VOPP1Q96AW1 172 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 TSSK1BQ9BXA7 367 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 SUV39H2Q9H5I1 410 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 ZFYVE1Q9HBF4 777 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 NMRAL1Q9HBL8 299 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 ZFP14Q9HCL3 533 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 IL17CQ9P0M4 197 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 FKBPLQ9UIM3 349 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 SLC8A2Q9UPR5 921 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 SLC27A6Q9Y2P4 619 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 PRRC2BQ5JSZ5 2229 aaKnown RBP19.85■□□□□ 0.77
TRIM47-204ENST00000587339 REV3LO60673 3130 aa19.85■□□□□ 0.77
TRIM47-204ENST00000587339 H7C0S8 307 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 BMP1P13497 986 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 SP100P23497 879 aaPredicted RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 FCARP24071 287 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 MC4RP32245 332 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ITIH4Q14624 930 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 CHI3L2Q15782 390 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ATAT1Q5SQI0 421 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ATG16L1Q676U5 607 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 TANGO2Q6ICL3 276 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ETFBKMTQ8IXQ9 262 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 PLPP6Q8IY26 295 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 TNS4Q8IZW8 715 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 OR2A12Q8NGT7 310 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 WFIKKN2Q8TEU8 576 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ECHDC3Q96DC8 303 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 TSPAN17Q96FV3 270 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 MRGPRX3Q96LB0 322 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 FAM83CQ9BQN1 747 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 C1QTNF1Q9BXJ1 281 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 INTS10Q9NVR2 710 aaKnown RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 COPG2Q9UBF2 871 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 FNDC3AQ9Y2H6 1198 aaKnown RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 VWA7Q9Y334 891 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 C1orf232A0A0U1RR37 186 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 CAPN8A6NHC0 703 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 DLDP09622 509 aaKnown RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 KCNA4P22459 653 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 HNF1BP35680 557 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 PCLAFQ15004 111 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 PDGFRLQ15198 375 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 HECTD2Q5U5R9 776 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 CES5AQ6NT32 575 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ZSWIM9Q86XI8 627 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 SCG3Q8WXD2 468 aaKnown RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 EID2BQ96D98 161 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 ZNF641Q96N77 438 aaPredicted RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 OLFM1Q99784 485 aa19.84■□□□□ 0.77
TRIM47-204ENST00000587339 CORO1CQ9ULV4 474 aaPredicted RBP19.84■□□□□ 0.77
TRIM47-204ENST00000587339 A0A087X1B8 175 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 OTOL1A6NHN0 477 aaPredicted RBP19.83■□□□□ 0.77
TRIM47-204ENST00000587339 ASLP04424 464 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 PRSS56P0CW18 603 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 CPA3P15088 417 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 ALDH3A1P30838 453 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 FAM45BPQ6NSW5 357 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 TBC1D1Q86TI0 1168 aaPredicted RBP19.83■□□□□ 0.77
TRIM47-204ENST00000587339 CENPLQ8N0S6 344 aaPredicted RBP19.83■□□□□ 0.77
TRIM47-204ENST00000587339 CHST14Q8NCH0 376 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 PPP1R14CQ8TAE6 165 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 TTC8Q8TAM2 541 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 777.4 ms