RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 C3orf30Q96M34 536 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 TMEM209Q96SK2 561 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 TIMMDC1Q9NPL8 285 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 VPS45Q9NRW7 570 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 PNPLA3Q9NST1 481 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 ARMC1Q9NVT9 282 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 MYRFQ9Y2G1 1151 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 MROH6A6NGR9 719 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 GPR182O15218 404 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 SEPT4O43236 478 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 HTRA2O43464 458 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 TRMUO75648 421 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 STAMBPO95630 424 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 MOCS2O96007 188 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CYP11A1P05108 521 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 THPOP40225 353 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 FLT3LGP49771 235 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 FCGRTP55899 365 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 HERVK_113P63132 956 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 UNC50Q53HI1 259 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 NHSL2Q5HYW2 709 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 KRT80Q6KB66 452 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 PPP4R4Q6NUP7 873 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 LDB1Q86U70 411 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CLYBLQ8N0X4 340 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 OR2T34Q8NGX1 318 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 OR2T3Q8NH03 318 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ERVK-6Q9BXR3 956 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ANKRD60Q9BZ19 345 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 SPC25Q9HBM1 224 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 NT5MQ9NPB1 228 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 FNIP2Q9P278 1114 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 NUDT5Q9UKK9 219 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 PADI3Q9ULW8 664 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 WASH4PA8MWX3 477 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 TIPRLO75663 272 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CKMT2P17540 419 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CD86P42081 329 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 GRIA3P42263 894 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 BRCC3P46736 316 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ALDH3B2P48448 385 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 SLC5A3P53794 718 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 NFKB2Q00653 900 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 NRG1Q02297 640 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 MAP7D1Q3KQU3 841 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 PITRM1Q5JRX3 1037 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 SCD5Q86SK9 330 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 RETREG3Q86VR2 466 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CANT1Q8WVQ1 401 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 HDAC10Q969S8 669 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ZNF512Q96ME7 567 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 GPATCH1Q9BRR8 931 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 MFSD1Q9H3U5 465 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 CAAP1Q9H8G2 361 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 DNAJC15Q9Y5T4 150 aa16.88■□□□□ 0.29
PRKCSH-205ENST00000587327 ZNF839A8K0R7 811 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 BBIP1A8MTZ0 92 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CA12O43570 354 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 ASGR1P07306 291 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 ARSDP51689 593 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 MAXP61244 160 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 SH3BP2P78314 561 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 PRKCQQ04759 706 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 ITKQ08881 620 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 GRIN3AQ8TCU5 1115 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 PTERQ96BW5 349 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 RMND5BQ96G75 393 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 C1orf74Q96LT6 269 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 GMPR2Q9P2T1 348 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 RSL24D1Q9UHA3 163 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 SQORQ9Y6N5 450 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 A0A0J9YYE9 177 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CCL22O00626 93 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 TNFRSF10BO14763 440 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 AKAP10O43572 662 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 ZNF623O75123 536 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 POMCP01189 267 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 MMP2P08253 660 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CDK4P11802 303 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 NELFEP18615 380 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CDH13P55290 713 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 PRAMEP78395 509 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 PRKCZQ05513 592 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CACNB2Q08289 660 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 SLC10A7Q0GE19 358 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 DSC3Q14574 896 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 IHHQ14623 411 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 MAPRE1Q15691 268 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 MARC1Q5VT66 337 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 CD300LGQ6UXG3 332 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 ERMP1Q7Z2K6 904 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 PIM3Q86V86 326 aa16.87■□□□□ 0.29
PRKCSH-205ENST00000587327 UMODL1-AS1Q8N2C9 162 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms