RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SHDQ96IW2 340 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SEC16BQ96JE7 1060 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 FAM111AQ96PZ2 611 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 TUBGCP5Q96RT8 1024 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 KXD1Q9BQD3 176 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 BBS2Q9BXC9 721 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 MAGEE1Q9HCI5 957 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 MLXIPLQ9NP71 852 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SNX15Q9NRS6 342 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 PCMTD2Q9NV79 361 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 NLE1Q9NVX2 485 aaPredicted RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 GDE1Q9NZC3 331 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SLC17A7Q9P2U7 560 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SLC25A13Q9UJS0 675 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 CCL26Q9Y258 94 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 CHKBQ9Y259 395 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 HS3ST2Q9Y278 367 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 VPS9D1Q9Y2B5 631 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 MTO1Q9Y2Z2 717 aaKnown RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 ATXN2Q99700 1313 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 A0A087X1B8 175 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 NRG2O14511 850 aaPredicted RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 FZD6O60353 706 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 SNX3O60493 162 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 EDF1O60869 148 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 POP4O95707 220 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 PABPC1P11940 636 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 OGNP20774 298 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 CD72P21854 359 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ARNTP27540 789 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ALDH3A1P30838 453 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 NNMTP40261 264 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 RGRP47804 291 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 GRIA4P48058 902 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 PRKAA2P54646 552 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 EPHB1P54762 984 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 SLC12A2P55011 1212 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 PPARDQ03181 441 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 PRKCQQ04759 706 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 BCL2L1Q07817 233 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 USP10Q14694 798 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 ZNF470Q6ECI4 717 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 LINGO4Q6UY18 593 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 YTHDF3Q7Z739 585 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 TMEM25Q86YD3 366 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 CILP2Q8IUL8 1156 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 NUDCD3Q8IVD9 361 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 PCDH20Q8N6Y1 951 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 TTC16Q8NEE8 873 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 OR13J1Q8NGT2 312 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 RDH11Q8TC12 318 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 WFDC5Q8TCV5 224 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ZNF398Q8TD17 642 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 WFIKKN2Q8TEU8 576 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 HDAC10Q969S8 669 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ELAC2Q9BQ52 826 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 CPEB1Q9BZB8 566 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 SMG9Q9H0W8 520 aaKnown RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 ATP13A3Q9H7F0 1226 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 FGFR1OP2Q9NVK5 253 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.41□□□□□ -0.74
LIG3-203ENST00000585370 SLC2A6Q9UGQ3 507 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 FBXO10Q9UK96 956 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 SLC8A2Q9UPR5 921 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ARL2BPQ9Y2Y0 163 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ACOT9Q9Y305 439 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 PCDHGC4Q9Y5F7 938 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 ACTL7AQ9Y615 435 aa10.41□□□□□ -0.74
LIG3-203ENST00000585370 FANCMQ8IYD8 2048 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 A0A096LPK6 155 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 SHISA7A6NL88 538 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 FAM170BA6NMN3 283 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 SCAMP3O14828 347 aaKnown RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 CD3EAPO15446 510 aaKnown RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 HTRA2O43464 458 aaPredicted RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 PLIN3O60664 434 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 ECI2O75521 394 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 PGLSO95336 258 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 TGDSO95455 350 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 ADH1CP00326 375 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 ASLP04424 464 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 C2P06681 752 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 BPGMP07738 259 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIG3-203ENST00000585370 TYRP14679 529 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 STMN1P16949 149 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 CEBPBP17676 345 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 POLR2EP19388 210 aaKnown RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 NFKBIAP25963 317 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 CD70P32970 193 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 PPARGP37231 505 aaPredicted RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 SLC26A3P40879 764 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 SLC1A2P43004 574 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 CSRP3P50461 194 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 HNRNPH2P55795 449 aaKnown RBP10.4□□□□□ -0.74
LIG3-203ENST00000585370 RAB10P61026 200 aa10.4□□□□□ -0.74
LIG3-203ENST00000585370 ECT2LQ008S8 904 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms