RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TMEM52BQ4KMG9 183 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 LRRC66Q68CR7 880 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 FBXL19Q6PCT2 694 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 TRMT10BQ6PF06 316 aaKnown RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 CES3Q6UWW8 571 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 USP30Q70CQ3 517 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 TSPAN33Q86UF1 283 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 FBF1Q8TES7 1133 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 CERS2Q96G23 380 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 SGSM3Q96HU1 749 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 DNAJC1Q96KC8 554 aaKnown RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 MRGPRX1Q96LB2 322 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 GPR63Q9BZJ6 419 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 POLMQ9NP87 494 aaPredicted RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 POLR3BQ9NW08 1133 aaPredicted RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 NFKBIL1Q9UBC1 381 aaPredicted RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 FETUBQ9UGM5 382 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 RABGEF1Q9UJ41 708 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 ZNF106Q9H2Y7 1883 aaKnown RBP16.14■□□□□ 0.17
SS18-226ENST00000585241 TCRBV21S2A2A0A5A6 115 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 STX7O15400 261 aaKnown RBP16.14■□□□□ 0.17
SS18-226ENST00000585241 ATP8B1O43520 1251 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 RPP40O75818 363 aaKnown RBP16.14■□□□□ 0.17
SS18-226ENST00000585241 CLDN7O95471 211 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 DNTTP04053 509 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 C1SP09871 688 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 GABRG2P18507 467 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 NDUFV2P19404 249 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 MAGEA9P43362 315 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 ARSDP51689 593 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 PTPN5P54829 565 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
SS18-226ENST00000585241 FAM193AP78312 1265 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 PTSQ03393 145 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 STAT4Q14765 748 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 LONRF1Q17RB8 773 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 TTC31Q49AM3 519 aaPredicted RBP16.14■□□□□ 0.17
SS18-226ENST00000585241 LRRC73Q5JTD7 316 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 ALS2CLQ60I27 953 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 PDPK2PQ6A1A2 396 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 LRIG3Q6UXM1 1119 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 CNTN4Q8IWV2 1026 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 SPEM1Q8N4L4 309 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 OR4K2Q8NGD2 314 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 OR13C4Q8NGS5 318 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 SIPA1Q96FS4 1042 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 CDKN2AIPNLQ96HQ2 116 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 CYTH2Q99418 400 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 TMEM109Q9BVC6 243 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 MFSD1Q9H3U5 465 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 SERGEFQ9UGK8 458 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 FZD4Q9ULV1 537 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 PLAAQ9Y263 795 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 FADS3Q9Y5Q0 445 aa16.14■□□□□ 0.17
SS18-226ENST00000585241 A0A0U1RQS6 177 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 CCDC78A2IDD5 438 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 RGSL1A5PLK6 1076 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 PLK4O00444 970 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 DCXO43602 365 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 BUD23O43709 281 aaKnown RBP16.13■□□□□ 0.17
SS18-226ENST00000585241 SHBGP04278 402 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 HADHAP40939 763 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 TAS2R38P59533 333 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 DCDC1P59894 354 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 CREB5Q02930 508 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 MGAT5Q09328 741 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 SFSWAPQ12872 951 aaKnown RBP16.13■□□□□ 0.17
SS18-226ENST00000585241 NAB1Q13506 487 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 ARHGEF7Q14155 803 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 KLHL38Q2WGJ6 581 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 ZDHHC20Q5W0Z9 365 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 CWF19L1Q69YN2 538 aaKnown RBP16.13■□□□□ 0.17
SS18-226ENST00000585241 LIPIQ6XZB0 460 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 KBTBD6Q86V97 674 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 LMNTD2Q8IXW0 634 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 HDDC3Q8N4P3 179 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 DTX3LQ8TDB6 740 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 PBXIP1Q96AQ6 731 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 ERLEC1Q96DZ1 483 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 TBATAQ96M53 351 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 ZIM3Q96PE6 472 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 UHRF1Q96T88 793 aaPredicted RBP16.13■□□□□ 0.17
SS18-226ENST00000585241 SLC6A17Q9H1V8 727 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 PPCSQ9HAB8 311 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 SMYD2Q9NRG4 433 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 GGT7Q9UJ14 662 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 SIT1Q9Y3P8 196 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 PKP3Q9Y446 797 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 TECTAO75443 2155 aa16.13■□□□□ 0.17
SS18-226ENST00000585241 A0A1W2PP55 124 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 C10orf142B7Z368 130 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 TSPAN6O43657 245 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 PLRG1O43660 514 aaKnown RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 SASH3O75995 380 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 VAPBO95292 243 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 IGLV3-19P01714 112 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 BPIP17213 487 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms