RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 REV3LO60673 3130 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 A0A096LPK6 155 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 G3V2L1 256 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 PEX1O43933 1283 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 CACNG3O60359 315 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 PRAMEF11O60813 436 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 HSPA4LO95757 839 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 TOP3BO95985 862 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 HLA-DQB2P05538 268 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 HOXD9P28356 352 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 RENBPP51606 427 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 SLC10A7Q0GE19 358 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 CDH17Q12864 832 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 CDH18Q13634 790 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 ITGA9Q13797 1035 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 GET4Q7L5D6 327 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 MAVSQ7Z434 540 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 TMEM126BQ8IUX1 230 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 MFN1Q8IWA4 741 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 FATE1Q969F0 183 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 TSNARE1Q96NA8 513 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 LINC00597Q9H2U6 94 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 NMRAL1Q9HBL8 299 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 ATP13A1Q9HD20 1204 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 PNPOQ9NVS9 261 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 OXSMQ9NWU1 459 aa15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 PRPF19Q9UMS4 504 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 AAR2Q9Y312 384 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-236ENST00000584991 CYBBP04839 570 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 THRAP10827 490 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 TCF3P15923 654 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GLDCP23378 1020 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 MZF1P28698 734 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 OXCT1P55809 520 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 MPP3Q13368 585 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 LRIT3Q3SXY7 679 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 PPM1JQ5JR12 505 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 MARC1Q5VT66 337 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 KCNMB4Q86W47 210 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 CELF5Q8N6W0 485 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 PDCD6IPQ8WUM4 868 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 PTCD2Q8WV60 388 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 FGF13Q92913 245 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 SERPINI1Q99574 410 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 KIFC1Q9BW19 673 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 ACE2Q9BYF1 805 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 TTYH1Q9H313 450 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 COG4Q9H9E3 785 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GLOD4Q9HC38 313 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 LMCD1Q9NZU5 365 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 DLGAP2Q9P1A6 1054 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 TBC1D14Q9P2M4 693 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 VPS28Q9UK41 221 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 CLEC4EQ9ULY5 219 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 RAP2CQ9Y3L5 183 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 WASF2Q9Y6W5 498 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GOLGA8QA0A0J9YX86 632 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GOLGA8OA6NCC3 632 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GOLGA8NF8WBI6 632 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 KDELR3O43731 214 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 PIM1P11309 404 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 COX4I1P13073 169 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 ETFBP38117 255 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 VIPR2P41587 438 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GRIN2CQ14957 1233 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 MPP7Q5T2T1 576 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 ZNF783Q6ZMS7 281 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 EP400NLQ6ZTU2 488 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 DHDDSQ86SQ9 333 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 TMEM25Q86YD3 366 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 IFT43Q96FT9 208 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 LRRC3BQ96PB8 259 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 GPR22Q99680 433 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 MLPHQ9BV36 600 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 DRC3Q9H069 523 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 PDFQ9HBH1 243 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 NT5MQ9NPB1 228 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 UBP1Q9NZI7 540 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 CLEC1BQ9P126 229 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 ACTL7AQ9Y615 435 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 WNT6Q9Y6F9 365 aa15.03■□□□□ -0
CDK5RAP3-236ENST00000584991 CBX4O00257 560 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 CASQ2O14958 399 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 BUD23O43709 281 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 C2P06681 752 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 HOXB8P17481 243 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 WEE1P30291 646 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 CSKP41240 450 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 MTTPP55157 894 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 SLC25A3Q00325 362 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 DLX2Q07687 328 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 CPSF7Q8N684 471 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 TEX26Q8N6G2 289 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 SPATA22Q8NHS9 363 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 RSPRY1Q96DX4 576 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 CLPTM1LQ96KA5 538 aa15.02■□□□□ -0
CDK5RAP3-236ENST00000584991 ASB16Q96NS5 453 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms